This page shows detailed deep learning-derived predictions and motifs for CTCF in neural crest cell using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000392.1 |
| Cell line/tissue: | neural crest cell |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR218MVT |
| Model: | BPNet |
| A [ | -8.21e-04 | -3.01e-03 | -2.85e-03 | -7.47e-04 | -9.12e-04 | 2.35e-03 | -6.17e-04 | -3.39e-04 | -1.95e-03 | 1.88e-02 | -1.64e-03 | -5.19e-03 | -6.21e-04 | -1.90e-03 | -3.99e-03 | -1.90e-03 | 7.57e-03 | 9.76e-04 | 3.79e-03 | 1.77e-03 | -2.06e-05 | -1.17e-03 | 2.66e-04 | 1.43e-04 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 7.37e-03 | 3.86e-02 | 4.06e-04 | 7.92e-02 | 1.31e-01 | 5.24e-02 | 7.53e-02 | 1.53e-01 | 9.56e-04 | -1.88e-03 | 1.17e-02 | 4.72e-03 | -3.54e-04 | -1.46e-03 | 1.64e-02 | 8.41e-03 | -1.79e-03 | 1.12e-03 | -8.72e-04 | -2.16e-04 | -1.23e-03 | -6.83e-04 | -1.88e-03 | -2.87e-03 | ] |
| G [ | 2.09e-02 | 6.54e-04 | 5.78e-02 | 1.56e-03 | -1.90e-04 | -1.64e-04 | -1.62e-04 | -6.34e-05 | -2.11e-04 | 1.64e-02 | 5.66e-02 | 1.69e-04 | 1.61e-01 | 9.57e-02 | -1.93e-03 | 5.97e-03 | 1.28e-02 | 3.20e-03 | -2.34e-04 | 7.34e-04 | 3.76e-03 | 6.30e-03 | 1.27e-02 | 2.55e-02 | ] |
| T [ | -1.87e-03 | 5.74e-03 | -1.63e-03 | -1.74e-03 | -1.22e-03 | -4.61e-03 | 9.44e-03 | -3.93e-04 | 7.07e-02 | -3.91e-03 | -1.54e-03 | 2.36e-02 | -7.56e-04 | -1.24e-03 | 5.20e-03 | -4.48e-03 | -3.92e-03 | -1.12e-03 | 4.42e-04 | 3.80e-04 | 4.49e-04 | -5.95e-04 | -1.80e-03 | -2.28e-03 | ] |
| A [ | 5021 | 3398 | 4023 | 2747 | 1120 | 14109 | 398 | 243 | 2618 | 15915 | 1092 | 6024 | 1 | 1617 | 7669 | 9487 | 16538 | 11137 | 13078 | 10946 | 9374 | 9150 | 10987 | 9951 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 12743 | 17732 | 1562 | 36378 | 38651 | 21997 | 26703 | 40621 | 3977 | 3224 | 12671 | 4719 | 1 | 1386 | 17872 | 14248 | 5589 | 10511 | 8296 | 8805 | 9505 | 9034 | 6968 | 6033 | ] |
| G [ | 18216 | 3549 | 29258 | 1043 | 586 | 1834 | 252 | 100 | 1257 | 15289 | 25826 | 1232 | 41358 | 35593 | 4208 | 8977 | 13711 | 10400 | 9150 | 10805 | 11923 | 13078 | 15005 | 18065 | ] |
| T [ | 5382 | 16682 | 6517 | 1192 | 1004 | 3421 | 14008 | 397 | 33509 | 6933 | 1773 | 29387 | 1 | 2765 | 11612 | 8649 | 5523 | 9314 | 10836 | 10805 | 10560 | 10099 | 8401 | 7311 | ] |
