This page shows detailed deep learning-derived predictions and motifs for CTCF in fibroblast of dermis using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000395.1 |
| Cell line/tissue: | fibroblast of dermis |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000APM |
| Model: | BPNet |
| A [ | -2.90e-04 | -3.33e-03 | -2.50e-03 | -8.14e-04 | -9.72e-04 | 1.67e-03 | -8.56e-04 | -4.02e-04 | -2.22e-03 | 1.83e-02 | -2.03e-03 | -5.05e-03 | -1.29e-04 | -2.45e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 7.66e-03 | 4.50e-02 | 8.92e-05 | 8.94e-02 | 1.43e-01 | 5.31e-02 | 7.20e-02 | 1.67e-01 | 8.78e-04 | -2.20e-03 | 1.30e-02 | 4.50e-03 | -9.89e-05 | -2.09e-03 | ] |
| G [ | 2.56e-02 | 8.89e-04 | 6.69e-02 | 1.19e-03 | -9.80e-05 | -3.66e-04 | -2.92e-04 | -9.72e-05 | -3.58e-04 | 1.42e-02 | 5.57e-02 | -1.31e-04 | 1.73e-01 | 9.18e-02 | ] |
| T [ | -2.44e-03 | 7.40e-03 | -2.30e-03 | -1.98e-03 | -1.23e-03 | -4.42e-03 | 1.30e-02 | -4.61e-04 | 7.10e-02 | -3.77e-03 | -1.69e-03 | 2.69e-02 | -2.52e-04 | -1.46e-03 | ] |
| A [ | 5372 | 3308 | 4388 | 3875 | 1257 | 16219 | 517 | 7 | 3320 | 17074 | 1582 | 7179 | 0 | 2156 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 14046 | 19389 | 1899 | 37728 | 42019 | 22519 | 29003 | 44955 | 4439 | 3760 | 14918 | 4505 | 0 | 1962 | ] |
| G [ | 20146 | 3215 | 31963 | 1807 | 578 | 1854 | 323 | 9 | 1271 | 16084 | 26339 | 1370 | 45026 | 37330 | ] |
| T [ | 5462 | 19114 | 6776 | 1616 | 1171 | 4434 | 15183 | 55 | 35996 | 8108 | 2188 | 31972 | 0 | 3578 | ] |
