This page shows detailed deep learning-derived predictions and motifs for CTCF in stomach using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000396.1 |
| Cell line/tissue: | stomach |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR185CCV |
| Model: | BPNet |
| A [ | -1.05e-03 | -2.64e-03 | -2.72e-03 | -4.83e-04 | -5.12e-04 | 5.87e-03 | -4.49e-04 | -2.20e-04 | -2.06e-03 | 1.65e-02 | -1.74e-03 | -4.76e-03 | -4.45e-04 | -2.62e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.03e-02 | 4.90e-02 | -1.33e-04 | 9.86e-02 | 1.51e-01 | 4.44e-02 | 6.39e-02 | 1.55e-01 | 4.69e-04 | -2.08e-03 | 1.03e-02 | 6.36e-03 | -2.37e-04 | -1.70e-03 | ] |
| G [ | 2.38e-02 | -2.82e-04 | 7.73e-02 | 4.69e-04 | -7.64e-05 | -1.91e-04 | -7.68e-05 | -5.21e-05 | -2.63e-04 | 1.46e-02 | 5.63e-02 | -5.89e-04 | 1.59e-01 | 8.38e-02 | ] |
| T [ | -2.53e-03 | 8.29e-03 | -3.03e-03 | -1.37e-03 | -7.47e-04 | -3.32e-03 | 1.64e-02 | -4.02e-04 | 7.02e-02 | -4.74e-03 | -1.64e-03 | 2.57e-02 | -5.47e-04 | -1.44e-03 | ] |
| A [ | 3454 | 1741 | 2961 | 2707 | 184 | 12113 | 416 | 167 | 1957 | 12284 | 1022 | 4506 | 2 | 2070 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 11113 | 18093 | 1316 | 30058 | 34808 | 19543 | 21327 | 34828 | 2808 | 3140 | 12040 | 5612 | 5 | 2323 | ] |
| G [ | 17309 | 1916 | 26126 | 1656 | 74 | 1664 | 481 | 85 | 1308 | 14660 | 20485 | 1617 | 35379 | 27829 | ] |
| T [ | 3517 | 13643 | 4989 | 972 | 327 | 2073 | 13169 | 313 | 29321 | 5309 | 1845 | 23658 | 7 | 3172 | ] |
