This page shows detailed deep learning-derived predictions and motifs for CTCF in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000399.1 |
| Cell line/tissue: | A549 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR432AXE |
| Model: | BPNet |
| A [ | -1.83e-03 | -9.33e-04 | 1.89e-02 | -1.77e-03 | -3.92e-03 | 6.13e-02 | -3.83e-04 | 1.71e-02 | -3.56e-03 | -6.25e-04 | -1.15e-03 | -3.16e-03 | 7.16e-03 | -2.59e-03 | -3.05e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 6.65e-02 | 1.35e-01 | -5.96e-04 | 4.75e-02 | 1.12e-02 | -2.07e-04 | -7.94e-05 | -1.74e-04 | -3.02e-04 | -6.56e-05 | 2.39e-04 | 8.42e-02 | -2.83e-04 | 3.06e-02 | 1.04e-02 | ] |
| G [ | -1.53e-03 | -3.64e-04 | 5.14e-03 | 1.02e-02 | -1.46e-03 | 3.38e-04 | 1.49e-01 | 5.75e-02 | 4.50e-02 | 1.40e-01 | 9.60e-02 | -5.04e-04 | 5.02e-02 | 9.91e-03 | -1.46e-03 | ] |
| T [ | -2.30e-03 | -6.83e-04 | -4.22e-03 | -1.76e-03 | 1.52e-02 | -2.03e-03 | -1.88e-04 | -4.73e-04 | 8.82e-03 | -3.91e-04 | -1.90e-04 | -2.46e-03 | -3.03e-03 | -1.30e-03 | 1.37e-02 | ] |
| A [ | 4506 | 1299 | 29187 | 2978 | 6892 | 37021 | 202 | 17559 | 2492 | 594 | 1089 | 6305 | 18088 | 4251 | 5978 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 33764 | 42181 | 2319 | 24669 | 17371 | 1269 | 28 | 366 | 1533 | 126 | 1685 | 33176 | 2238 | 22657 | 15566 | ] |
| G [ | 3123 | 561 | 6764 | 15443 | 3878 | 3424 | 44194 | 26159 | 24331 | 43406 | 38149 | 1384 | 21980 | 13133 | 4522 | ] |
| T [ | 3131 | 482 | 6254 | 1433 | 16382 | 2810 | 99 | 439 | 16166 | 397 | 3600 | 3658 | 2218 | 4482 | 18457 | ] |