This page shows detailed deep learning-derived predictions and motifs for CTCF in CD8-positive and alpha-beta T cell using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000400.1 |
| Cell line/tissue: | CD8-positive and alpha-beta T cell |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR116AKQ |
| Model: | BPNet |
| A [ | -4.62e-04 | -2.04e-03 | -2.15e-03 | -5.10e-05 | -3.45e-04 | 6.23e-03 | -3.16e-04 | -1.95e-04 | -1.47e-03 | 1.66e-02 | -1.32e-03 | -3.64e-03 | -4.59e-04 | -2.09e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 7.58e-03 | 4.82e-02 | -3.81e-04 | 9.75e-02 | 1.43e-01 | 4.42e-02 | 6.21e-02 | 1.46e-01 | -7.31e-06 | -1.97e-03 | 8.14e-03 | 6.39e-03 | -2.65e-04 | -1.63e-03 | ] |
| G [ | 2.69e-02 | -1.59e-04 | 7.91e-02 | 1.90e-04 | -8.98e-05 | -1.67e-04 | -4.92e-05 | -2.76e-05 | -1.90e-04 | 1.34e-02 | 5.04e-02 | -5.28e-04 | 1.47e-01 | 7.87e-02 | ] |
| T [ | -2.35e-03 | 8.45e-03 | -1.97e-03 | -1.04e-03 | -5.75e-04 | -2.50e-03 | 1.57e-02 | -2.06e-04 | 7.13e-02 | -4.22e-03 | -1.19e-03 | 2.53e-02 | -5.47e-04 | -1.21e-03 | ] |
| A [ | 2685 | 1301 | 2311 | 2267 | 291 | 9398 | 281 | 10 | 1230 | 9835 | 694 | 3402 | 129 | 1528 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 8162 | 13790 | 1060 | 22863 | 26399 | 15435 | 16297 | 27139 | 1660 | 2150 | 9071 | 3997 | 95 | 1463 | ] |
| G [ | 13575 | 1452 | 20132 | 1285 | 153 | 949 | 220 | 6 | 719 | 11236 | 16017 | 985 | 26634 | 21859 | ] |
| T [ | 2776 | 10655 | 3695 | 783 | 355 | 1417 | 10400 | 43 | 23589 | 3978 | 1416 | 18814 | 340 | 2347 | ] |
