Detailed information of deep learning profile BP000405.1

This page shows detailed deep learning-derived predictions and motifs for E2F1 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: E2F1
Model ID: BP000405.1
Cell line/tissue: K562
Class: Fork head/winged helix factors
Family: E2F
Best Match(es): MA0024.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q01094  
Source: ENCSR153DWR
Model: BPNet

Contribution weight matrix (CWM)

A [ -4.92e-05 -7.28e-06 -6.57e-05 -2.98e-06 2.57e-06 -5.84e-06 -2.72e-05 2.08e-04 6.61e-05 8.35e-04 ]
C [ -1.51e-04 1.71e-03 -1.94e-04 8.58e-03 1.01e-06 7.38e-03 -2.08e-05 1.04e-03 -6.61e-05 1.66e-04 ]
G [ 3.81e-04 -1.19e-04 3.15e-03 -1.94e-06 9.52e-03 -1.29e-05 5.05e-03 -3.55e-04 4.18e-04 -2.05e-04 ]
T [ 1.13e-03 -7.75e-05 -3.12e-05 1.45e-06 0.00e+00 -8.46e-06 -3.42e-05 -1.09e-04 2.74e-04 8.17e-05 ]

Frequency matrix

A [ 16159 16328 9538 5 1 1374 1814 14189 15878 18036 ]
C [ 32011 31240 31946 96445 54 86248 24394 37295 30670 35153 ]
G [ 31327 37540 45442 183 96575 7873 59499 31469 32440 28405 ]
T [ 17138 11526 9709 2 5 1140 10929 13682 17647 15040 ]

Alternative motif patterns (AMPs)

4 profiles found for the same TF (E2F1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000245.1 E2F1 ENCSR000EVM HeLa-S3 Homo sapiens
BP000832.1 E2F1 ENCSR563LLO K562 Homo sapiens
BP000877.1 E2F1 ENCSR717ZZW HepG2 Homo sapiens
BP001075.1 E2F1 ENCSR000EVJ HeLa-S3 Homo sapiens
Showing 4 profiles of page 1 from 1 pages
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