Detailed information of deep learning profile BP000407.1

This page shows detailed deep learning-derived predictions and motifs for NR2C2 in WTC11 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NR2C2
Model ID: BP000407.1
Cell line/tissue: WTC11
Class: Nuclear receptors with C4 zinc fingers
Family: RXR-related receptors (NR2)
Best Match(es): MA0504.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P49116  
Source: ENCSR454GVT
Model: BPNet

Contribution weight matrix (CWM)

A [ -4.76e-04 4.27e-05 2.02e-02 3.46e-04 -4.21e-05 -2.93e-05 -1.85e-04 -2.32e-05 -2.30e-05 2.61e-02 1.83e-04 -9.14e-05 -2.43e-04 ]
C [ 1.39e-03 -4.12e-04 6.35e-04 2.43e-02 2.38e-02 4.07e-04 1.32e-03 7.86e-04 -3.50e-04 -3.53e-05 2.31e-02 2.30e-02 2.47e-03 ]
G [ -9.89e-07 2.02e-02 -1.48e-04 8.51e-06 7.29e-05 2.27e-05 -9.84e-05 7.90e-05 2.24e-02 -3.53e-05 -1.24e-05 1.37e-04 1.08e-04 ]
T [ 1.51e-02 -8.22e-05 -9.77e-05 -1.05e-04 -3.23e-04 1.37e-02 6.04e-03 1.96e-02 -7.59e-05 4.48e-06 -1.39e-04 -3.41e-04 7.62e-03 ]

Frequency matrix

A [ 23 42 459 48 4 11 23 4 38 541 28 18 14 ]
C [ 97 47 100 546 573 122 294 53 51 51 567 567 257 ]
G [ 26 495 42 11 17 19 31 25 510 16 11 11 17 ]
T [ 469 31 14 10 21 463 267 533 16 7 9 19 327 ]

4 profiles found for the same TF (NR2C2) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000260.1 NR2C2 ENCSR000EVS HepG2 Homo sapiens
BP000295.1 NR2C2 ENCSR559ZKI HepG2 Homo sapiens
BP000895.1 NR2C2 ENCSR516SWI K562 Homo sapiens
BP001251.1 NR2C2 ENCSR750LYM K562 Homo sapiens
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