Detailed information of deep learning profile BP000409.1

This page shows detailed deep learning-derived predictions and motifs for NFIB in MCF-7 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NFIB
Model ID: BP000409.1
Cell line/tissue: MCF-7
Class: SMAD/NF-1 DNA-binding domain factors
Family: Nuclear factor 1
Best Match(es): MA1643.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: O00712  
Source: ENCSR702BYX
Model: BPNet

Contribution weight matrix (CWM)

A [ -2.02e-03 -7.16e-04 -3.26e-06 4.09e-06 2.18e-03 1.16e-02 -2.24e-03 -2.01e-03 -4.55e-04 -5.00e-04 -8.09e-05 -5.05e-06 -1.57e-07 7.97e-02 4.68e-02 ]
C [ 1.96e-02 -3.96e-05 2.07e-06 1.12e-05 8.03e-02 -7.47e-04 7.69e-03 3.87e-03 2.54e-03 -2.67e-05 -1.50e-04 1.35e-01 1.46e-01 -1.01e-04 -8.51e-04 ]
G [ -2.07e-03 1.82e-04 1.44e-01 1.30e-01 -4.61e-04 -1.48e-04 2.66e-03 4.10e-03 7.25e-03 -7.54e-04 9.43e-02 2.33e-06 -5.20e-07 -3.94e-05 5.22e-03 ]
T [ 1.52e-02 7.30e-02 -1.49e-06 -6.62e-05 -1.97e-04 -7.74e-04 -1.29e-05 -2.28e-03 -2.17e-03 1.10e-02 6.03e-04 -5.45e-06 -6.60e-07 -1.77e-04 -7.54e-04 ]

Frequency matrix

A [ 2151 1029 18 215 4718 14860 5725 8095 8024 9922 229 109 46 29362 16720 ]
C [ 14816 475 52 61 27398 6677 11328 8457 8134 1865 493 32985 33207 2944 1249 ]
G [ 1857 3233 33185 32896 830 2090 8173 8522 11437 6482 28895 40 41 338 13687 ]
T [ 14490 28578 59 142 367 9687 8088 8241 5718 15045 3697 180 20 670 1658 ]

Alternative motif patterns (AMPs)

2 profiles found for the same TF (NFIB) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000219.1 NFIB ENCSR414WBQ HepG2 Homo sapiens
BP000888.1 NFIB ENCSR582ZOA MCF-7 Homo sapiens
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