This page shows detailed deep learning-derived predictions and motifs for CTCF in HCT116 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000411.1 |
| Cell line/tissue: | HCT116 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 MA1930.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR107GWZ |
| Model: | BPNet |
| A [ | -2.65e-03 | -2.55e-03 | -1.14e-03 | -1.32e-03 | 9.31e-04 | -8.46e-04 | -2.32e-04 | -1.89e-03 | 2.51e-02 | -1.73e-03 | -5.32e-03 | -6.48e-04 | -1.91e-03 | -4.45e-03 | -1.92e-03 | 1.04e-02 | 1.83e-03 | 4.68e-03 | 1.32e-03 | -6.54e-04 | -1.91e-03 | -1.69e-04 | -4.58e-04 | 3.26e-03 | 2.84e-02 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 2.90e-02 | 3.99e-04 | 7.17e-02 | 1.26e-01 | 5.63e-02 | 9.44e-02 | 1.79e-01 | 1.89e-03 | -1.81e-03 | 1.22e-02 | 3.43e-03 | -3.03e-04 | -1.60e-03 | 1.45e-02 | 9.88e-03 | -2.42e-03 | -5.57e-04 | -1.38e-03 | -6.03e-04 | -1.78e-03 | -9.59e-04 | -1.36e-03 | -3.09e-03 | -1.96e-03 | -1.50e-03 | ] |
| G [ | 1.67e-03 | 4.77e-02 | 1.92e-03 | -3.72e-04 | -5.17e-04 | -2.12e-04 | -1.85e-05 | -4.17e-04 | 1.51e-02 | 6.07e-02 | 2.19e-04 | 1.76e-01 | 1.13e-01 | -2.46e-03 | 6.09e-03 | 1.54e-02 | 3.29e-03 | -7.03e-04 | 6.99e-04 | 3.55e-03 | 6.91e-03 | 1.44e-02 | 3.18e-02 | 1.56e-03 | -2.97e-03 | ] |
| T [ | 3.25e-03 | -8.70e-04 | -1.99e-03 | -1.66e-03 | -4.62e-03 | 5.79e-03 | -2.75e-04 | 8.18e-02 | -3.39e-03 | -1.21e-03 | 3.21e-02 | -8.45e-04 | -9.32e-04 | 8.04e-03 | -4.21e-03 | -4.41e-03 | -9.02e-04 | 5.35e-04 | 8.70e-04 | 1.49e-03 | 1.31e-04 | -1.60e-03 | -1.97e-03 | 2.66e-03 | -5.34e-04 | ] |
| A [ | 5710 | 6858 | 5690 | 2759 | 15398 | 991 | 116 | 2939 | 21762 | 1470 | 9113 | 78 | 2284 | 10064 | 12579 | 22176 | 14796 | 17626 | 15210 | 12600 | 12202 | 14338 | 12951 | 16927 | 25565 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 22882 | 5218 | 39390 | 49031 | 32875 | 38877 | 54953 | 4487 | 3125 | 17763 | 5346 | 42 | 1957 | 22733 | 19070 | 6887 | 13425 | 10817 | 11627 | 12398 | 11433 | 8546 | 7586 | 11993 | 11440 | ] |
| G [ | 7607 | 31967 | 5464 | 1725 | 2237 | 287 | 34 | 1034 | 22679 | 32746 | 2435 | 54684 | 47127 | 5778 | 12599 | 19058 | 15025 | 12511 | 14401 | 15698 | 17750 | 20698 | 25444 | 13383 | 8497 | ] |
| T [ | 19089 | 11245 | 4745 | 1774 | 4777 | 15132 | 185 | 46828 | 7722 | 3309 | 38394 | 484 | 3920 | 16713 | 11040 | 7167 | 12042 | 14333 | 14050 | 14591 | 13903 | 11706 | 9307 | 12985 | 9786 | ] |
