This page shows detailed deep learning-derived predictions and motifs for CTCF in breast epithelium using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000412.1 |
| Cell line/tissue: | breast epithelium |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR697YIN |
| Model: | BPNet |
| A [ | -1.11e-03 | -2.34e-03 | -2.41e-03 | -1.53e-04 | -4.63e-04 | 5.26e-03 | -1.70e-04 | -2.08e-04 | -1.49e-03 | 1.57e-02 | -1.55e-03 | -4.19e-03 | -4.15e-04 | -2.16e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.23e-02 | 4.26e-02 | -5.49e-04 | 8.76e-02 | 1.40e-01 | 4.25e-02 | 5.74e-02 | 1.55e-01 | 6.98e-04 | -1.41e-03 | 1.16e-02 | 5.30e-03 | -1.32e-04 | -1.50e-03 | ] |
| G [ | 2.13e-02 | -3.22e-04 | 7.04e-02 | 6.92e-05 | -3.06e-05 | 1.14e-04 | -3.38e-05 | -2.55e-05 | -1.23e-04 | 1.54e-02 | 5.94e-02 | 5.88e-05 | 1.56e-01 | 8.30e-02 | ] |
| T [ | -2.13e-03 | 7.07e-03 | -1.65e-03 | -9.85e-04 | -6.05e-04 | -2.58e-03 | 1.58e-02 | -2.32e-04 | 6.72e-02 | -4.61e-03 | -1.46e-03 | 2.40e-02 | -5.57e-04 | -1.58e-03 | ] |
| A [ | 2834 | 1529 | 2553 | 2373 | 252 | 10883 | 313 | 60 | 1487 | 10554 | 807 | 3748 | 2 | 1706 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 9602 | 14338 | 976 | 25507 | 29036 | 15968 | 17256 | 29504 | 2083 | 2223 | 10191 | 3579 | 1 | 1571 | ] |
| G [ | 14156 | 1623 | 21946 | 1108 | 116 | 1290 | 287 | 31 | 832 | 12399 | 17287 | 1070 | 29747 | 23844 | ] |
| T [ | 3160 | 12261 | 4277 | 765 | 348 | 1611 | 11896 | 157 | 25350 | 4576 | 1467 | 21355 | 2 | 2630 | ] |
