This page shows detailed deep learning-derived predictions and motifs for NFIC in SK-N-SH using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | NFIC |
| Model ID: | BP000413.1 |
| Cell line/tissue: | SK-N-SH |
| Class: | SMAD/NF-1 DNA-binding domain factors |
| Family: | Nuclear factor 1 |
| Best Match(es): | MA0161.1 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P08651 |
| Source: | ENCSR000BSV |
| Model: | BPNet |
| A [ | -4.16e-04 | -1.10e-05 | 0.00e+00 | 0.00e+00 | 4.41e-05 | 6.93e-05 | 8.98e-03 | 1.95e-04 | -2.19e-04 | 1.11e-04 | 1.83e-03 | 2.34e-05 | -6.31e-04 | -2.58e-04 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 5.55e-03 | 1.14e-03 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 3.94e-02 | -1.61e-04 | 1.76e-03 | 1.58e-03 | 1.38e-03 | -2.41e-04 | 3.40e-04 | 3.47e-03 | 1.52e-02 | ] |
| G [ | 9.16e-05 | 1.64e-06 | -6.34e-06 | 7.70e-02 | 5.16e-02 | 0.00e+00 | -9.85e-06 | 2.56e-03 | 2.92e-03 | 2.34e-03 | 1.70e-03 | 1.02e-03 | -2.53e-04 | 1.39e-04 | ] |
| T [ | 2.83e-03 | 2.37e-02 | 3.24e-02 | 0.00e+00 | 0.00e+00 | -4.63e-06 | -2.09e-04 | -4.66e-04 | -7.77e-04 | -5.98e-04 | -3.01e-04 | 1.73e-03 | 1.33e-03 | -1.08e-04 | ] |
| A [ | 13587 | 4047 | 2479 | 0 | 2790 | 17125 | 62599 | 26100 | 30030 | 30942 | 36507 | 23113 | 23810 | 24402 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 43090 | 43929 | 2548 | 0 | 496 | 100903 | 16886 | 29866 | 31445 | 28828 | 21127 | 24289 | 49764 | 55624 | ] |
| G [ | 22721 | 4374 | 6137 | 121982 | 117763 | 1446 | 6969 | 34095 | 32606 | 33622 | 30879 | 38481 | 16662 | 17896 | ] |
| T [ | 42584 | 69632 | 110819 | 0 | 933 | 2507 | 35528 | 31921 | 27901 | 28590 | 33469 | 36099 | 31746 | 24060 | ] |
