Detailed information of deep learning profile BP000417.1

This page shows detailed deep learning-derived predictions and motifs for USF2 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: USF2
Model ID: BP000417.1
Cell line/tissue: HepG2
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
Best Match(es): MA0526.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q15853  
Source: ENCSR145QNL
Model: BPNet

Contribution weight matrix (CWM)

A [ 2.50e-03 -2.19e-03 -9.45e-06 7.42e-02 1.82e-06 3.50e-04 -9.42e-06 5.95e-05 3.68e-02 -4.02e-04 ]
C [ -1.41e-03 2.60e-03 1.11e-01 -1.11e-04 6.74e-02 4.34e-05 1.69e-05 1.79e-06 -3.91e-04 3.54e-02 ]
G [ 1.51e-02 -1.67e-03 5.71e-06 1.06e-04 -1.10e-04 8.31e-02 -1.34e-05 1.05e-01 2.14e-04 -8.60e-04 ]
T [ -1.84e-03 8.72e-03 -1.52e-06 -2.23e-04 3.07e-03 1.35e-05 8.65e-02 1.37e-05 -2.82e-04 2.51e-03 ]

Frequency matrix

A [ 5099 2131 129 18144 90 2172 210 24 10372 1151 ]
C [ 3687 6389 19675 498 14533 1166 317 70 2768 11341 ]
G [ 9369 3408 42 656 1563 16481 225 19662 5176 2835 ]
T [ 1715 7942 24 572 3684 51 19118 114 1554 4543 ]

Other motif patterns

11 profiles found for the same TF (USF2) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP001236.1 USF2 ENCSR513UQG IMR-90 Homo sapiens
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