Detailed information of deep learning profile BP000417.1

This page shows detailed deep learning-derived predictions and motifs for USF2 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: USF2
Model ID: BP000417.1
Cell line/tissue: HepG2
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
Best Match(es): MA0526.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q15853  
Source: ENCSR145QNL
Model: BPNet

Contribution weight matrix (CWM)

A [ 2.50e-03 -2.19e-03 -9.45e-06 7.42e-02 1.82e-06 3.50e-04 -9.42e-06 5.95e-05 3.68e-02 -4.02e-04 ]
C [ -1.41e-03 2.60e-03 1.11e-01 -1.11e-04 6.74e-02 4.34e-05 1.69e-05 1.79e-06 -3.91e-04 3.54e-02 ]
G [ 1.51e-02 -1.67e-03 5.71e-06 1.06e-04 -1.10e-04 8.31e-02 -1.34e-05 1.05e-01 2.14e-04 -8.60e-04 ]
T [ -1.84e-03 8.72e-03 -1.52e-06 -2.23e-04 3.07e-03 1.35e-05 8.65e-02 1.37e-05 -2.82e-04 2.51e-03 ]

Frequency matrix

A [ 5099 2131 129 18144 90 2172 210 24 10372 1151 ]
C [ 3687 6389 19675 498 14533 1166 317 70 2768 11341 ]
G [ 9369 3408 42 656 1563 16481 225 19662 5176 2835 ]
T [ 1715 7942 24 572 3684 51 19118 114 1554 4543 ]

Other motif patterns

11 profiles found for the same TF (USF2) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000226.1 USF2 ENCSR000EHG K562 Homo sapiens
BP000448.1 USF2 ENCSR000EEF HepG2 Homo sapiens
BP000548.1 USF2 ENCSR563FBT A549 Homo sapiens
BP000554.1 USF2 ENCSR359NFW K562 Homo sapiens
BP000793.1 USF2 ENCSR000ECW HeLa-S3 Homo sapiens
BP000809.1 USF2 ENCSR000DZU GM12878 Homo sapiens
BP000863.1 USF2 ENCSR578KEN K562 Homo sapiens
BP000966.1 USF2 ENCSR000ECD H1 Homo sapiens
BP001081.1 USF2 ENCSR945NFL SK-N-SH Homo sapiens
BP001168.1 USF2 ENCSR229QAN WTC11 Homo sapiens
Showing 10 profiles of page 1 from 2 pages