This page shows detailed deep learning-derived predictions and motifs for CTCF in skeletal muscle myoblast using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000420.1 |
| Cell line/tissue: | skeletal muscle myoblast |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000ANE |
| Model: | BPNet |
| A [ | -1.85e-03 | -1.38e-03 | 2.79e-02 | -2.10e-03 | -5.04e-03 | 8.15e-02 | -4.50e-04 | 1.28e-02 | -5.94e-03 | -1.49e-03 | -2.48e-03 | -2.32e-03 | 8.03e-03 | -2.55e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.09e-01 | 1.96e-01 | 4.46e-04 | 6.50e-02 | 1.74e-02 | -4.09e-04 | -1.33e-04 | -2.96e-04 | -3.65e-04 | -1.96e-04 | 2.00e-03 | 7.36e-02 | 5.32e-04 | 2.76e-02 | ] |
| G [ | -2.34e-03 | -5.11e-04 | 6.64e-03 | 1.42e-02 | -2.67e-03 | 1.65e-03 | 1.95e-01 | 8.49e-02 | 6.36e-02 | 1.71e-01 | 1.02e-01 | 5.94e-04 | 5.10e-02 | 1.01e-02 | ] |
| T [ | -3.44e-03 | -9.61e-04 | -6.67e-03 | -2.48e-03 | 2.29e-02 | -2.57e-03 | -4.86e-04 | -1.08e-03 | 2.69e-03 | -1.10e-03 | -1.02e-03 | -3.17e-03 | -3.64e-03 | -6.99e-04 | ] |
| A [ | 5692 | 1482 | 37676 | 3919 | 9810 | 46009 | 661 | 21565 | 4931 | 187 | 2238 | 10393 | 22712 | 6839 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 44768 | 55750 | 3280 | 32207 | 21763 | 1701 | 130 | 761 | 2008 | 18 | 4011 | 39158 | 4383 | 27059 | ] |
| G [ | 3855 | 389 | 7603 | 19764 | 4983 | 6116 | 56880 | 34645 | 32295 | 57771 | 46811 | 2866 | 26982 | 17155 | ] |
| T [ | 3791 | 484 | 9547 | 2215 | 21550 | 4280 | 435 | 1135 | 18872 | 130 | 5046 | 5689 | 4029 | 7052 | ] |