This page shows detailed deep learning-derived predictions and motifs for CTCF in OCI-LY3 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000421.1 |
| Cell line/tissue: | OCI-LY3 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR756ZKG |
| Model: | BPNet |
| A [ | -1.79e-03 | -1.52e-03 | 2.02e-02 | -1.32e-03 | -3.80e-03 | 6.47e-02 | -3.20e-04 | 1.47e-02 | -4.91e-03 | -6.46e-04 | -1.86e-03 | -4.05e-03 | 9.04e-03 | -2.89e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 7.31e-02 | 1.50e-01 | 4.64e-04 | 4.60e-02 | 1.10e-02 | -2.77e-04 | -8.52e-05 | -2.76e-04 | -2.55e-04 | -5.46e-05 | 7.94e-04 | 9.08e-02 | -3.16e-04 | 3.54e-02 | ] |
| G [ | -1.99e-03 | -6.37e-04 | 6.38e-03 | 1.18e-02 | -1.95e-03 | 1.03e-03 | 1.68e-01 | 7.72e-02 | 5.27e-02 | 1.64e-01 | 1.10e-01 | -8.00e-04 | 5.56e-02 | 1.02e-02 | ] |
| T [ | -2.71e-03 | -1.26e-03 | -5.15e-03 | -2.51e-03 | 1.82e-02 | -2.37e-03 | -4.59e-04 | -7.78e-04 | 7.29e-03 | -6.01e-04 | -1.45e-04 | -2.96e-03 | -3.68e-03 | -8.24e-04 | ] |
| A [ | 7535 | 3090 | 39628 | 5503 | 10850 | 50767 | 876 | 23548 | 4356 | 0 | 1820 | 9701 | 25938 | 6255 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 46216 | 58895 | 4412 | 33317 | 23428 | 1777 | 170 | 367 | 1870 | 0 | 2939 | 46055 | 3890 | 32196 | ] |
| G [ | 5306 | 1255 | 9412 | 22625 | 6147 | 6397 | 62688 | 39687 | 34787 | 64309 | 54000 | 2612 | 30915 | 18564 | ] |
| T [ | 5251 | 1068 | 10857 | 2863 | 23883 | 5369 | 575 | 707 | 23296 | 0 | 5549 | 5941 | 3566 | 7295 | ] |