This page shows detailed deep learning-derived predictions and motifs for CTCF in gastrocnemius medialis using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000423.1 |
| Cell line/tissue: | gastrocnemius medialis |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR355ALW |
| Model: | BPNet |
| A [ | -7.16e-04 | -2.36e-03 | -2.15e-03 | -2.97e-04 | -2.67e-04 | 6.24e-03 | -3.96e-04 | -2.40e-04 | -1.67e-03 | 1.78e-02 | -1.54e-03 | -4.52e-03 | -4.90e-04 | -2.38e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 9.64e-03 | 4.20e-02 | -8.57e-05 | 8.23e-02 | 1.40e-01 | 4.31e-02 | 6.00e-02 | 1.46e-01 | 4.31e-04 | -1.92e-03 | 8.52e-03 | 6.32e-03 | -2.24e-04 | -1.39e-03 | ] |
| G [ | 2.31e-02 | -4.83e-06 | 7.19e-02 | 7.53e-04 | -1.45e-06 | -1.21e-04 | -4.83e-05 | -2.33e-05 | -1.65e-04 | 1.35e-02 | 5.38e-02 | -2.69e-04 | 1.43e-01 | 7.91e-02 | ] |
| T [ | -2.19e-03 | 7.44e-03 | -1.79e-03 | -1.21e-03 | -3.74e-04 | -2.80e-03 | 1.44e-02 | -2.94e-04 | 6.54e-02 | -4.21e-03 | -1.38e-03 | 2.12e-02 | -7.02e-04 | -1.23e-03 | ] |
| A [ | 3127 | 1702 | 2731 | 2664 | 74 | 12157 | 329 | 73 | 1869 | 12065 | 1031 | 4549 | 203 | 2142 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 10781 | 16744 | 899 | 29317 | 33642 | 18525 | 20098 | 33608 | 2378 | 2909 | 11693 | 5145 | 215 | 2367 | ] |
| G [ | 16677 | 1708 | 25768 | 1061 | 23 | 1301 | 336 | 24 | 1010 | 13867 | 19136 | 1665 | 32687 | 26032 | ] |
| T [ | 3287 | 13718 | 4474 | 829 | 133 | 1889 | 13109 | 167 | 28615 | 5032 | 2012 | 22514 | 767 | 3331 | ] |
