This page shows detailed deep learning-derived predictions and motifs for HNF4A in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | HNF4A |
| Model ID: | BP000425.1 |
| Cell line/tissue: | HepG2 |
| Class: | Nuclear receptors with C4 zinc fingers |
| Family: | RXR-related receptors (NR2) |
| Best Match(es): | MA0114.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P41235 |
| Source: | ENCSR469FBY |
| Model: | BPNet |
| A [ | 7.80e-03 | -9.77e-04 | -1.33e-03 | -2.65e-03 | -1.63e-04 | 6.64e-02 | 5.63e-02 | 5.71e-02 | -5.39e-05 | -1.33e-03 | -1.54e-03 | -3.34e-04 | 2.84e-02 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | -3.31e-04 | -7.63e-04 | -1.40e-03 | 6.82e-03 | 7.44e-02 | -3.40e-04 | -6.95e-04 | -6.55e-05 | -2.03e-05 | -6.42e-04 | 1.57e-02 | 6.95e-02 | -1.23e-03 | ] |
| G [ | 1.05e-02 | 6.12e-02 | 3.68e-03 | -8.19e-04 | -3.61e-04 | 4.24e-04 | -4.32e-04 | 8.80e-04 | 1.05e-01 | 8.06e-03 | -1.17e-03 | -4.39e-04 | 1.40e-03 | ] |
| T [ | -2.51e-03 | -1.12e-03 | 1.01e-02 | 5.86e-03 | 1.16e-04 | -2.77e-04 | -6.98e-04 | -3.59e-04 | -2.08e-05 | 3.71e-02 | 1.37e-02 | 5.71e-04 | -2.51e-03 | ] |
| A [ | 27568 | 7614 | 14223 | 10914 | 1198 | 61268 | 48535 | 56804 | 1 | 7209 | 4981 | 1965 | 44874 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 4429 | 3214 | 8241 | 19266 | 57954 | 1156 | 2365 | 310 | 0 | 2587 | 27341 | 54515 | 5889 | ] |
| G [ | 23307 | 48381 | 19813 | 14213 | 1615 | 2173 | 12174 | 7205 | 65611 | 15636 | 8769 | 1426 | 6746 | ] |
| T [ | 10308 | 6404 | 23337 | 21220 | 4846 | 1016 | 2539 | 1295 | 1 | 40180 | 24522 | 7707 | 8104 | ] |
