Detailed information of deep learning profile BP000426.1

This page shows detailed deep learning-derived predictions and motifs for CREB1 in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: CREB1
Model ID: BP000426.1
Cell line/tissue: A549
Class: Basic leucine zipper factors (bZIP)
Family: CREB-related factors
Best Match(es): MA0018.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P16220  
Source: ENCSR000BRA
Model: BPNet

Contribution weight matrix (CWM)

A [ -8.33e-04 -1.35e-03 2.61e-02 -8.43e-05 -5.74e-05 -7.09e-05 6.13e-04 4.14e-02 -6.14e-04 -2.30e-04 1.59e-03 -9.32e-04 -5.54e-04 -9.82e-04 9.72e-05 -5.78e-04 -7.81e-04 -6.24e-04 ]
C [ -1.08e-04 -2.56e-04 -3.60e-04 7.62e-02 -4.75e-05 7.24e-05 3.16e-02 -3.99e-05 5.88e-03 2.17e-03 5.21e-05 3.68e-03 3.37e-03 1.73e-03 2.40e-03 2.24e-03 8.78e-03 1.93e-03 ]
G [ -8.10e-04 1.06e-02 6.10e-03 -4.01e-05 8.35e-02 -5.53e-06 -8.61e-05 5.09e-04 -7.68e-04 7.59e-04 1.91e-03 1.58e-03 1.35e-03 3.79e-03 3.58e-03 7.02e-03 1.67e-03 8.16e-03 ]
T [ 1.61e-02 6.17e-03 -6.72e-04 -1.74e-04 0.00e+00 4.82e-02 -1.67e-04 -7.05e-05 5.99e-03 2.00e-03 5.36e-04 -4.30e-04 4.62e-04 -6.07e-05 -1.21e-03 -6.46e-04 8.83e-06 -7.80e-04 ]

Frequency matrix

A [ 5086 4300 8005 165 111 1861 6953 17798 4468 4672 5156 5343 5546 5308 5413 5351 4868 4784 ]
C [ 8766 5228 6009 28235 1 7790 15803 3592 10406 9020 7704 9505 9608 8584 8732 8634 10010 9377 ]
G [ 7061 11820 12398 30 28681 5361 2931 5465 7973 7698 9652 9294 8343 9161 9814 9696 8667 9891 ]
T [ 7880 7446 2381 363 0 13780 3105 1938 5945 7403 6281 4651 5296 5740 4833 5112 5248 4741 ]

Other motif patterns

13 profiles found for the same TF (CREB1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP001120.1 CREB1 ENCSR000BRC A549 Homo sapiens
BP001147.1 CREB1 ENCSR331ORD HepG2 Homo sapiens
BP001157.1 CREB1 ENCSR000BUF GM12878 Homo sapiens
Showing 3 profiles of page 2 from 2 pages