This page shows detailed deep learning-derived predictions and motifs for CTCF in esophagus squamous epithelium using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000427.1 |
| Cell line/tissue: | esophagus squamous epithelium |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR450FRI |
| Model: | BPNet |
| A [ | -1.17e-03 | -2.75e-04 | 2.38e-02 | -1.58e-03 | -3.32e-03 | 6.81e-02 | -3.65e-04 | 1.19e-02 | -4.07e-03 | -4.72e-04 | -1.34e-03 | -1.82e-03 | 7.33e-03 | -1.82e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 8.18e-02 | 1.51e-01 | -6.81e-04 | 5.04e-02 | 1.36e-02 | -2.17e-04 | -4.90e-05 | -8.45e-05 | -9.56e-05 | -2.99e-05 | 7.52e-04 | 5.85e-02 | -3.54e-04 | 2.03e-02 | ] |
| G [ | -1.67e-03 | -2.03e-04 | 4.32e-03 | 1.18e-02 | -2.10e-03 | 6.29e-04 | 1.48e-01 | 6.40e-02 | 3.97e-02 | 1.30e-01 | 7.78e-02 | -3.20e-04 | 3.77e-02 | 7.50e-03 | ] |
| T [ | -2.32e-03 | -3.43e-04 | -4.68e-03 | -1.64e-03 | 1.62e-02 | -2.08e-03 | -2.17e-04 | -5.31e-04 | 4.92e-03 | -3.16e-04 | -2.62e-04 | -2.08e-03 | -2.65e-03 | -5.44e-04 | ] |
| A [ | 4454 | 0 | 33031 | 2984 | 7601 | 41678 | 203 | 17854 | 3958 | 669 | 2058 | 8512 | 19059 | 6083 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 39497 | 49806 | 2145 | 27388 | 20601 | 1377 | 42 | 577 | 2514 | 322 | 3168 | 33563 | 3929 | 22653 | ] |
| G [ | 2925 | 0 | 6585 | 17999 | 4250 | 3833 | 49440 | 30673 | 26458 | 48264 | 40492 | 2706 | 23498 | 15418 | ] |
| T [ | 2931 | 0 | 8045 | 1434 | 17354 | 2918 | 121 | 702 | 16877 | 551 | 4089 | 5025 | 3320 | 5651 | ] |
