Detailed information of deep learning profile BP000429.1

This page shows detailed deep learning-derived predictions and motifs for FOXA1 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: FOXA1
Model ID: BP000429.1
Cell line/tissue: HepG2
Class: Fork head/winged helix factors
Family: FOX
Best Match(es): MA0148.4 MA0148.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P55317  
Source: ENCSR267DFA
Model: BPNet

Contribution weight matrix (CWM)

A [ -1.94e-04 1.14e-02 -6.83e-06 -8.16e-06 -3.55e-06 5.48e-02 -2.99e-05 6.91e-03 -1.03e-03 1.20e-02 ]
C [ -1.63e-05 -2.13e-05 -1.86e-06 -1.98e-06 2.15e-06 0.00e+00 4.05e-02 -7.87e-04 3.24e-03 -4.49e-04 ]
G [ -3.45e-05 3.40e-02 -2.33e-06 9.96e-04 7.61e-03 2.01e-05 -1.51e-06 -7.83e-05 -8.54e-04 -5.32e-04 ]
T [ 4.62e-02 0.00e+00 6.11e-02 3.93e-02 2.98e-02 0.00e+00 8.32e-04 3.96e-03 9.57e-03 4.24e-03 ]

Frequency matrix

A [ 628 4407 67 306 373 15049 684 5932 1929 6686 ]
C [ 293 227 35 215 360 40 12085 2889 3902 1006 ]
G [ 213 10691 46 2451 4651 220 169 396 2265 1556 ]
T [ 14251 60 15237 12413 10001 76 2447 6168 7290 6137 ]

Alternative motif patterns (AMPs)

Other motif patterns

11 profiles found for the same TF (FOXA1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP001104.1 FOXA1 ENCSR865RXA HepG2 Homo sapiens
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