This page shows detailed deep learning-derived predictions and motifs for CTCF in GM12872 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000432.1 |
| Cell line/tissue: | GM12872 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000DRN |
| Model: | BPNet |
| A [ | -3.26e-04 | -2.99e-03 | -2.95e-03 | -6.83e-04 | -9.20e-04 | 3.19e-03 | -8.46e-04 | -3.52e-04 | -2.01e-03 | 1.89e-02 | -2.03e-03 | -5.74e-03 | -8.08e-04 | -2.63e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 6.77e-03 | 4.23e-02 | 6.49e-04 | 8.73e-02 | 1.45e-01 | 5.67e-02 | 7.56e-02 | 1.63e-01 | 1.67e-03 | -1.84e-03 | 1.04e-02 | 4.73e-03 | -5.26e-04 | -1.76e-03 | ] |
| G [ | 2.57e-02 | 9.65e-04 | 6.93e-02 | 1.82e-03 | -1.89e-04 | -4.01e-04 | -2.62e-04 | -1.44e-04 | -3.97e-04 | 1.28e-02 | 5.70e-02 | 2.87e-04 | 1.66e-01 | 9.40e-02 | ] |
| T [ | -2.21e-03 | 3.66e-03 | -3.23e-03 | -2.22e-03 | -1.13e-03 | -4.88e-03 | 8.88e-03 | -4.20e-04 | 6.62e-02 | -4.14e-03 | -1.58e-03 | 2.26e-02 | -1.15e-03 | -1.93e-03 | ] |
| A [ | 5709 | 3536 | 4674 | 4425 | 86 | 16134 | 731 | 19 | 3222 | 18361 | 1571 | 8039 | 4 | 3007 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 14250 | 22106 | 2091 | 39502 | 48313 | 27956 | 29189 | 48457 | 4087 | 4028 | 17237 | 5498 | 6 | 2682 | ] |
| G [ | 22968 | 3877 | 34006 | 2775 | 18 | 1384 | 452 | 7 | 1247 | 18539 | 26869 | 2047 | 48503 | 38389 | ] |
| T [ | 5594 | 19002 | 7749 | 1819 | 104 | 3047 | 18149 | 38 | 39966 | 7593 | 2843 | 32938 | 8 | 4443 | ] |