This page shows detailed deep learning-derived predictions and motifs for CTCF in left lung using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000434.1 |
| Cell line/tissue: | left lung |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR736PZW |
| Model: | BPNet |
| A [ | -1.15e-03 | -2.74e-03 | -3.39e-03 | -8.21e-04 | -4.33e-04 | 6.06e-03 | -3.44e-04 | -1.83e-04 | -2.16e-03 | 1.98e-02 | -1.61e-03 | -4.65e-03 | -4.95e-04 | -2.69e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.21e-02 | 5.35e-02 | -6.26e-04 | 1.04e-01 | 1.60e-01 | 4.94e-02 | 6.51e-02 | 1.66e-01 | 3.13e-04 | -2.31e-03 | 1.02e-02 | 6.80e-03 | -2.51e-04 | -1.66e-03 | ] |
| G [ | 3.14e-02 | -5.22e-04 | 8.82e-02 | 7.32e-05 | -9.06e-05 | -1.84e-04 | -9.67e-05 | -5.07e-05 | -2.71e-04 | 1.39e-02 | 6.00e-02 | -7.51e-04 | 1.68e-01 | 8.82e-02 | ] |
| T [ | -3.27e-03 | 8.41e-03 | -2.34e-03 | -1.10e-03 | -6.68e-04 | -2.91e-03 | 1.99e-02 | -3.56e-04 | 7.94e-02 | -5.34e-03 | -1.47e-03 | 2.64e-02 | -6.89e-04 | -1.93e-03 | ] |
| A [ | 2892 | 1507 | 2681 | 2534 | 237 | 11269 | 227 | 88 | 1398 | 11905 | 797 | 3710 | 131 | 1792 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 9644 | 14692 | 1022 | 26174 | 30122 | 16982 | 17962 | 30473 | 2003 | 2090 | 9985 | 4108 | 71 | 1472 | ] |
| G [ | 15104 | 1581 | 22636 | 1183 | 78 | 1031 | 172 | 24 | 792 | 12138 | 18498 | 967 | 30243 | 24821 | ] |
| T [ | 3119 | 12979 | 4420 | 868 | 322 | 1476 | 12398 | 174 | 26567 | 4627 | 1480 | 21974 | 314 | 2675 | ] |
