Detailed information of deep learning profile BP000437.1

This page shows detailed deep learning-derived predictions and motifs for RUNX1 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: RUNX1
Model ID: BP000437.1
Cell line/tissue: K562
Class: Runt domain factors
Family: Runt-related factors
Best Match(es): MA0002.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q03347  
Source: ENCSR588AKU
Model: BPNet

Contribution weight matrix (CWM)

A [ 8.09e-04 3.92e-03 1.36e-02 -4.23e-05 5.16e-05 5.14e-03 -1.28e-05 5.33e-03 ]
C [ 2.83e-04 -2.82e-05 3.85e-05 1.31e-02 1.49e-02 4.50e-06 1.41e-02 4.30e-05 ]
G [ -2.01e-05 6.38e-04 9.22e-05 3.22e-06 0.00e+00 2.24e-03 5.73e-05 6.97e-05 ]
T [ 2.39e-03 -6.25e-06 -2.20e-05 2.02e-04 1.01e-05 4.56e-05 9.32e-06 -1.49e-05 ]

Frequency matrix

A [ 1069 1590 2592 11 19 2032 11 2139 ]
C [ 369 237 28 2647 2734 32 2729 248 ]
G [ 151 626 129 19 13 522 21 135 ]
T [ 1186 322 26 98 9 189 14 253 ]

Other motif patterns

1 profiles found for the same TF (RUNX1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP001093.1 RUNX1 ENCSR414TYY K562 Homo sapiens
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