Detailed information of deep learning profile BP000442.1

This page shows detailed deep learning-derived predictions and motifs for REST in SK-N-SH using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: REST
Model ID: BP000442.1
Cell line/tissue: SK-N-SH
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
Best Match(es): MA0138.3 MA0138.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q13127  
Source: ENCSR000BJJ
Model: BPNet

Contribution weight matrix (CWM)

A [ -1.40e-04 -5.21e-04 2.14e-02 5.06e-04 -7.40e-07 -7.47e-06 1.46e-04 -6.06e-05 0.00e+00 0.00e+00 3.29e-02 -3.15e-03 -5.56e-04 2.61e-03 -1.46e-03 -2.49e-03 -2.18e-03 -3.11e-03 2.46e-03 4.39e-03 -4.11e-04 -1.71e-03 -2.38e-03 ]
C [ -3.48e-05 7.43e-04 1.37e-02 -2.10e-04 1.18e-01 0.00e+00 -2.73e-04 -2.36e-06 1.25e-01 1.32e-01 -2.71e-04 3.78e-03 1.11e-02 4.40e-04 5.94e-03 7.74e-03 2.30e-02 5.66e-03 9.73e-04 7.75e-04 2.25e-03 2.72e-03 1.95e-02 ]
G [ 5.18e-02 3.79e-02 0.00e+00 5.55e-02 0.00e+00 0.00e+00 8.49e-02 2.80e-05 1.01e-05 -2.38e-05 5.26e-03 8.70e-03 1.90e-02 3.43e-02 3.83e-03 5.01e-03 6.10e-03 6.66e-03 1.32e-02 1.70e-02 4.03e-03 1.47e-02 2.34e-03 ]
T [ -5.42e-04 -3.72e-04 -6.19e-04 -5.62e-04 0.00e+00 9.98e-02 -2.46e-05 8.36e-02 6.69e-05 -7.71e-05 -1.38e-03 3.14e-03 -2.36e-04 7.33e-04 2.89e-02 -1.82e-03 -3.66e-04 7.85e-03 -9.75e-04 8.14e-04 1.15e-02 -6.58e-05 4.34e-03 ]

Frequency matrix

A [ 216 101 854 226 6 8 51 41 6 3 1294 368 266 344 229 341 236 314 495 435 361 333 330 ]
C [ 30 299 599 60 1767 0 87 4 1738 1755 110 309 497 315 380 588 765 460 351 394 460 489 515 ]
G [ 1425 1203 26 1308 1 2 1613 51 7 7 233 634 751 849 351 540 407 458 626 661 538 578 500 ]
T [ 114 182 306 191 11 1775 34 1689 34 20 148 474 271 277 825 316 377 553 313 295 426 385 440 ]

Other motif patterns

28 profiles found for the same TF (REST) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000032.1 REST ENCSR000BSP MCF-7 Homo sapiens
BP000035.1 REST ENCSR000BTV neural cell Homo sapiens
BP000036.1 REST ENCSR000BUP Panc1 Homo sapiens
BP000037.1 REST ENCSR000BUU Ishikawa Homo sapiens
BP000038.1 REST ENCSR000BVI HCT116 Homo sapiens
BP000063.1 REST ENCSR054JMQ K562 Homo sapiens
BP000075.1 REST ENCSR137ZMQ K562 Homo sapiens
BP000179.1 REST ENCSR893QWP liver Homo sapiens
BP000180.1 REST ENCSR896UBV HEK293 Homo sapiens
BP000343.1 REST ENCSR892DRK A549 Homo sapiens
Showing 10 profiles of page 2 from 3 pages