Detailed information of deep learning profile BP000442.1

This page shows detailed deep learning-derived predictions and motifs for REST in SK-N-SH using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: REST
Model ID: BP000442.1
Cell line/tissue: SK-N-SH
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
Best Match(es): MA0138.3 MA0138.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q13127  
Source: ENCSR000BJJ
Model: BPNet

Contribution weight matrix (CWM)

A [ 4.34e-03 -6.58e-05 1.15e-02 8.14e-04 -9.75e-04 7.85e-03 -3.66e-04 -1.82e-03 2.89e-02 7.33e-04 -2.36e-04 3.14e-03 -1.38e-03 -7.71e-05 6.69e-05 8.36e-02 -2.46e-05 9.98e-02 0.00e+00 -5.62e-04 -6.19e-04 -3.72e-04 -5.42e-04 ]
C [ 2.34e-03 1.47e-02 4.03e-03 1.70e-02 1.32e-02 6.66e-03 6.10e-03 5.01e-03 3.83e-03 3.43e-02 1.90e-02 8.70e-03 5.26e-03 -2.38e-05 1.01e-05 2.80e-05 8.49e-02 0.00e+00 0.00e+00 5.55e-02 0.00e+00 3.79e-02 5.18e-02 ]
G [ 1.95e-02 2.72e-03 2.25e-03 7.75e-04 9.73e-04 5.66e-03 2.30e-02 7.74e-03 5.94e-03 4.40e-04 1.11e-02 3.78e-03 -2.71e-04 1.32e-01 1.25e-01 -2.36e-06 -2.73e-04 0.00e+00 1.18e-01 -2.10e-04 1.37e-02 7.43e-04 -3.48e-05 ]
T [ -2.38e-03 -1.71e-03 -4.11e-04 4.39e-03 2.46e-03 -3.11e-03 -2.18e-03 -2.49e-03 -1.46e-03 2.61e-03 -5.56e-04 -3.15e-03 3.29e-02 0.00e+00 0.00e+00 -6.06e-05 1.46e-04 -7.47e-06 -7.40e-07 5.06e-04 2.14e-02 -5.21e-04 -1.40e-04 ]

Frequency matrix

A [ 440 385 426 295 313 553 377 316 825 277 271 474 148 20 34 1689 34 1775 11 191 306 182 114 ]
C [ 500 578 538 661 626 458 407 540 351 849 751 634 233 7 7 51 1613 2 1 1308 26 1203 1425 ]
G [ 515 489 460 394 351 460 765 588 380 315 497 309 110 1755 1738 4 87 0 1767 60 599 299 30 ]
T [ 330 333 361 435 495 314 236 341 229 344 266 368 1294 3 6 41 51 8 6 226 854 101 216 ]

Other motif patterns

28 profiles found for the same TF (REST) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000001.1 REST ENCSR000ATM K562 Homo sapiens
BP000002.1 REST ENCSR000BGF GM12878 Homo sapiens
BP000004.1 REST ENCSR000BHM H1 Homo sapiens
BP000006.1 REST ENCSR000BJL HepG2 Homo sapiens
BP000007.1 REST ENCSR000BJO Panc1 Homo sapiens
BP000017.1 REST ENCSR000BMW K562 Homo sapiens
BP000024.1 REST ENCSR000BOT HepG2 Homo sapiens
BP000025.1 REST ENCSR000BOX PFSK-1 Homo sapiens
BP000027.1 REST ENCSR000BPK Panc1 Homo sapiens
BP000030.1 REST ENCSR000BQS GM12878 Homo sapiens
Showing 10 profiles of page 1 from 3 pages