Detailed information of deep learning profile BP000443.1

This page shows detailed deep learning-derived predictions and motifs for NRF1 in MCF-7 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NRF1
Model ID: BP000443.1
Cell line/tissue: MCF-7
Class: Uncharacterized
Family: NRF
Best Match(es): MA0506.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q5ZL67  
Source: ENCSR135ANT
Model: BPNet

Contribution weight matrix (CWM)

A [ 9.73e-04 -7.36e-04 -3.78e-04 -1.83e-04 7.41e-03 -1.05e-04 4.63e-06 -7.15e-07 -6.82e-07 0.00e+00 1.17e-02 ]
C [ -1.33e-04 3.01e-02 -1.43e-04 3.76e-02 -1.45e-03 1.32e-03 1.75e-06 6.74e-02 -2.22e-06 5.34e-02 -1.09e-03 ]
G [ 2.63e-02 -3.76e-04 3.79e-02 -2.72e-04 1.02e-03 -2.86e-04 6.10e-02 -3.83e-06 6.39e-02 4.82e-07 2.97e-03 ]
T [ -1.67e-04 -1.37e-04 -2.81e-04 -1.94e-04 -9.08e-04 2.78e-02 -4.47e-07 -1.39e-05 -3.93e-06 2.75e-04 -7.63e-04 ]

Frequency matrix

A [ 3282 3228 2619 2058 5283 1004 442 15 8 34 8667 ]
C [ 4340 11895 3088 13181 9098 4696 243 22115 5 20660 4006 ]
G [ 12335 4702 14377 4920 5326 3290 21453 19 22158 339 7882 ]
T [ 2227 2359 2100 2025 2476 13194 46 35 13 1151 1629 ]

11 profiles found for the same TF (NRF1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000371.1 NRF1 ENCSR000EHH K562 Homo sapiens
BP000502.1 NRF1 ENCSR689JMY HepG2 Homo sapiens
BP000505.1 NRF1 ENCSR998AJK K562 Homo sapiens
BP000575.1 NRF1 ENCSR000EDJ HeLa-S3 Homo sapiens
BP000586.1 NRF1 ENCSR837EYC K562 Homo sapiens
BP000819.1 NRF1 ENCSR000DZO GM12878 Homo sapiens
BP000972.1 NRF1 ENCSR494TDU K562 Homo sapiens
BP001109.1 NRF1 ENCSR000EEH HepG2 Homo sapiens
BP001112.1 NRF1 ENCSR000ECC H1 Homo sapiens
BP001198.1 NRF1 ENCSR000EHZ SK-N-SH Homo sapiens
Showing 10 profiles of page 1 from 2 pages