Detailed information of deep learning profile BP000443.1

This page shows detailed deep learning-derived predictions and motifs for NRF1 in MCF-7 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NRF1
Model ID: BP000443.1
Cell line/tissue: MCF-7
Class: Uncharacterized
Family: NRF
Best Match(es): MA0506.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q5ZL67  
Source: ENCSR135ANT
Model: BPNet

Contribution weight matrix (CWM)

A [ -7.63e-04 2.75e-04 -3.93e-06 -1.39e-05 -4.47e-07 2.78e-02 -9.08e-04 -1.94e-04 -2.81e-04 -1.37e-04 -1.67e-04 ]
C [ 2.97e-03 4.82e-07 6.39e-02 -3.83e-06 6.10e-02 -2.86e-04 1.02e-03 -2.72e-04 3.79e-02 -3.76e-04 2.63e-02 ]
G [ -1.09e-03 5.34e-02 -2.22e-06 6.74e-02 1.75e-06 1.32e-03 -1.45e-03 3.76e-02 -1.43e-04 3.01e-02 -1.33e-04 ]
T [ 1.17e-02 0.00e+00 -6.82e-07 -7.15e-07 4.63e-06 -1.05e-04 7.41e-03 -1.83e-04 -3.78e-04 -7.36e-04 9.73e-04 ]

Frequency matrix

A [ 1629 1151 13 35 46 13194 2476 2025 2100 2359 2227 ]
C [ 7882 339 22158 19 21453 3290 5326 4920 14377 4702 12335 ]
G [ 4006 20660 5 22115 243 4696 9098 13181 3088 11895 4340 ]
T [ 8667 34 8 15 442 1004 5283 2058 2619 3228 3282 ]

11 profiles found for the same TF (NRF1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000371.1 NRF1 ENCSR000EHH K562 Homo sapiens
BP000502.1 NRF1 ENCSR689JMY HepG2 Homo sapiens
BP000505.1 NRF1 ENCSR998AJK K562 Homo sapiens
BP000575.1 NRF1 ENCSR000EDJ HeLa-S3 Homo sapiens
BP000586.1 NRF1 ENCSR837EYC K562 Homo sapiens
BP000819.1 NRF1 ENCSR000DZO GM12878 Homo sapiens
BP000972.1 NRF1 ENCSR494TDU K562 Homo sapiens
BP001109.1 NRF1 ENCSR000EEH HepG2 Homo sapiens
BP001112.1 NRF1 ENCSR000ECC H1 Homo sapiens
BP001198.1 NRF1 ENCSR000EHZ SK-N-SH Homo sapiens
Showing 10 profiles of page 1 from 2 pages