This page shows detailed deep learning-derived predictions and motifs for CTCF in gastrocnemius medialis using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000445.1 |
| Cell line/tissue: | gastrocnemius medialis |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR071XWO |
| Model: | BPNet |
| A [ | 3.52e-03 | -1.62e-03 | -3.46e-04 | 2.97e-02 | -1.11e-03 | -4.72e-03 | 7.19e-02 | -2.73e-04 | 1.70e-02 | -2.42e-03 | -5.02e-04 | -1.00e-03 | -2.19e-03 | 6.31e-03 | -2.39e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | -2.23e-03 | 9.29e-02 | 1.60e-01 | -7.53e-04 | 6.47e-02 | 2.08e-02 | -1.82e-04 | -2.58e-05 | -2.06e-06 | 8.63e-06 | -5.28e-05 | 9.52e-06 | 8.45e-02 | -2.84e-04 | 2.44e-02 | ] |
| G [ | 2.16e-02 | -1.29e-03 | -7.25e-05 | 7.22e-03 | 9.44e-03 | -2.04e-03 | 5.07e-04 | 1.57e-01 | 6.58e-02 | 4.53e-02 | 1.46e-01 | 9.29e-02 | -2.34e-04 | 4.91e-02 | 1.21e-02 | ] |
| T [ | -4.29e-03 | -2.08e-03 | -2.09e-04 | -3.86e-03 | -1.23e-03 | 1.41e-02 | -1.39e-03 | -1.72e-04 | -2.39e-04 | 4.85e-03 | -3.37e-04 | -8.02e-04 | -2.68e-03 | -2.08e-03 | -8.27e-04 | ] |
| A [ | 6222 | 1865 | 85 | 16172 | 1004 | 3429 | 20152 | 147 | 8504 | 1201 | 349 | 884 | 3221 | 9184 | 2461 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 2610 | 19754 | 23804 | 918 | 14701 | 10703 | 860 | 39 | 306 | 1289 | 243 | 1186 | 17757 | 1499 | 11501 | ] |
| G [ | 11141 | 1186 | 22 | 4134 | 7660 | 1940 | 1726 | 23657 | 14848 | 13436 | 23029 | 20001 | 1031 | 11977 | 7745 | ] |
| T [ | 3955 | 1125 | 18 | 2705 | 563 | 7858 | 1191 | 86 | 271 | 8003 | 308 | 1858 | 1920 | 1270 | 2222 | ] |
