Detailed information of deep learning profile BP000446.1

This page shows detailed deep learning-derived predictions and motifs for CUX1 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: CUX1
Model ID: BP000446.1
Cell line/tissue: K562
Class: Homeo domain factors
Family: HD-CUT
Best Match(es): MA0754.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P31271  
Source: ENCSR000EFO
Model: BPNet

Contribution weight matrix (CWM)

A [ 5.25e-02 -6.40e-05 -9.32e-04 1.31e-05 6.86e-02 -2.19e-04 2.51e-03 1.18e-02 ]
C [ -1.01e-04 2.07e-05 1.17e-02 1.15e-05 -1.25e-06 3.73e-05 6.95e-03 -1.00e-03 ]
G [ -1.18e-04 -6.86e-06 -1.59e-04 6.34e-02 8.78e-06 -1.51e-05 -9.57e-04 2.73e-04 ]
T [ -2.84e-04 5.49e-02 1.26e-02 2.76e-06 -9.59e-06 5.72e-02 3.40e-04 -2.49e-03 ]

Frequency matrix

A [ 8042 88 1266 123 8442 179 1986 3460 ]
C [ 25 235 1361 13 9 150 2455 1348 ]
G [ 177 83 232 8289 5 10 1015 1521 ]
T [ 222 8060 5606 41 10 8127 3009 2137 ]

3 profiles found for the same TF (CUX1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000433.1 CUX1 ENCSR000DYR GM12878 Homo sapiens
BP000522.1 CUX1 ENCSR017CEO MCF-7 Homo sapiens
BP000567.1 CUX1 ENCSR178NTX K562 Homo sapiens
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