Detailed information of deep learning profile BP000448.1

This page shows detailed deep learning-derived predictions and motifs for USF2 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: USF2
Model ID: BP000448.1
Cell line/tissue: HepG2
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
Best Match(es): MA0526.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q15853  
Source: ENCSR000EEF
Model: BPNet

Contribution weight matrix (CWM)

A [ 2.51e-03 -3.05e-04 3.90e-06 9.47e-02 4.52e-06 3.78e-03 -5.15e-05 6.95e-07 1.09e-02 -1.42e-03 ]
C [ -5.44e-04 -3.48e-04 1.19e-01 -3.12e-06 9.20e-02 1.25e-04 2.84e-05 1.77e-06 -1.33e-03 1.26e-02 ]
G [ 3.80e-02 -5.08e-04 4.40e-06 -2.56e-06 2.02e-04 7.49e-02 -8.75e-05 1.17e-01 1.33e-03 -1.60e-03 ]
T [ -1.89e-04 3.59e-02 0.00e+00 -6.48e-06 3.31e-04 -1.57e-08 8.32e-02 -3.20e-06 -1.12e-03 5.08e-03 ]

Frequency matrix

A [ 5262 1842 47 21233 22 4115 459 17 9872 1718 ]
C [ 2816 4993 21616 110 18576 1469 428 24 3209 10354 ]
G [ 12601 2682 25 208 1063 16046 363 21548 6237 3770 ]
T [ 1024 12185 15 152 2042 73 20453 114 2385 5861 ]

11 profiles found for the same TF (USF2) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP001236.1 USF2 ENCSR513UQG IMR-90 Homo sapiens
Showing 1 profiles of page 2 from 2 pages