This page shows detailed deep learning-derived predictions and motifs for CTCF in foreskin keratinocyte using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000457.1 |
| Cell line/tissue: | foreskin keratinocyte |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR817HTJ |
| Model: | BPNet |
| A [ | -1.07e-03 | -9.98e-04 | 1.53e-02 | -1.32e-03 | -2.65e-03 | 4.94e-02 | -2.39e-04 | 9.29e-03 | -4.01e-03 | -8.75e-04 | -1.54e-03 | -2.33e-03 | 6.61e-03 | -2.29e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 5.98e-02 | 1.17e-01 | 2.70e-04 | 3.63e-02 | 1.12e-02 | -2.51e-04 | -6.75e-05 | -1.87e-04 | -1.55e-04 | -4.79e-05 | 4.24e-04 | 5.27e-02 | 1.02e-04 | 2.35e-02 | ] |
| G [ | -1.29e-03 | -4.11e-04 | 4.56e-03 | 1.06e-02 | -1.55e-03 | 1.05e-03 | 1.25e-01 | 6.03e-02 | 3.55e-02 | 1.14e-01 | 7.45e-02 | -2.35e-04 | 3.87e-02 | 7.93e-03 | ] |
| T [ | -2.05e-03 | -8.45e-04 | -3.55e-03 | -1.75e-03 | 1.27e-02 | -1.49e-03 | -3.29e-04 | -5.80e-04 | 3.53e-03 | -6.79e-04 | -3.94e-04 | -2.00e-03 | -2.41e-03 | -6.17e-04 | ] |
| A [ | 7561 | 566 | 46649 | 5059 | 12514 | 57586 | 199 | 24754 | 7415 | 1199 | 3181 | 12858 | 28823 | 8588 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 54340 | 71248 | 3361 | 37873 | 26836 | 1787 | 15 | 563 | 3064 | 312 | 4593 | 47286 | 5643 | 32121 | ] |
| G [ | 4988 | 27 | 8523 | 26139 | 7038 | 6944 | 71616 | 45679 | 36808 | 69325 | 57402 | 4185 | 32125 | 21935 | ] |
| T [ | 5054 | 102 | 13410 | 2872 | 25554 | 5626 | 113 | 947 | 24656 | 1107 | 6767 | 7615 | 5353 | 9299 | ] |
