This page shows detailed deep learning-derived predictions and motifs for CTCF in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000458.1 |
| Cell line/tissue: | A549 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000AUF |
| Model: | BPNet |
| A [ | -8.21e-04 | -3.89e-03 | -3.38e-03 | -4.04e-04 | -5.38e-04 | 6.34e-03 | -8.86e-04 | -4.20e-04 | -2.16e-03 | 2.22e-02 | -2.59e-03 | -6.17e-03 | -1.13e-03 | -2.56e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 9.77e-03 | 6.58e-02 | -1.53e-04 | 1.25e-01 | 1.83e-01 | 5.94e-02 | 8.84e-02 | 1.91e-01 | 1.04e-03 | -2.47e-03 | 1.27e-02 | 5.90e-03 | -7.67e-04 | -2.12e-03 | ] |
| G [ | 4.05e-02 | 1.94e-05 | 9.97e-02 | 1.37e-03 | -2.15e-05 | -2.69e-04 | -2.13e-04 | -7.58e-05 | -4.09e-04 | 1.53e-02 | 5.37e-02 | 6.68e-04 | 1.73e-01 | 8.96e-02 | ] |
| T [ | -2.99e-03 | 8.02e-03 | -3.84e-03 | -2.03e-03 | -6.89e-04 | -5.24e-03 | 1.62e-02 | -3.48e-04 | 7.54e-02 | -4.48e-03 | -1.24e-03 | 2.57e-02 | -1.37e-03 | -1.94e-03 | ] |
| A [ | 4127 | 1958 | 3174 | 1171 | 42 | 15262 | 329 | 86 | 2761 | 13448 | 1282 | 6196 | 54 | 1479 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 11394 | 17844 | 890 | 35317 | 36607 | 17783 | 22392 | 36457 | 3203 | 3207 | 12943 | 3522 | 32 | 903 | ] |
| G [ | 16965 | 1733 | 27333 | 133 | 12 | 964 | 187 | 17 | 950 | 13519 | 20414 | 1348 | 36458 | 32083 | ] |
| T [ | 4264 | 15215 | 5353 | 129 | 89 | 2741 | 13842 | 190 | 29837 | 6576 | 2111 | 25683 | 206 | 2286 | ] |
