Detailed information of deep learning profile BP000459.1

This page shows detailed deep learning-derived predictions and motifs for REST in HeLa-S3 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: REST
Model ID: BP000459.1
Cell line/tissue: HeLa-S3
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
Best Match(es): MA0138.3 MA0138.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q13127  
Source: ENCSR000BMN
Model: BPNet

Contribution weight matrix (CWM)

A [ -3.80e-04 -7.62e-04 -7.22e-04 -8.38e-06 6.79e-05 1.02e-01 -8.28e-05 1.06e-01 -1.79e-05 -1.71e-03 3.12e-03 4.52e-04 -7.93e-04 ]
C [ 1.95e-03 3.28e-02 9.51e-04 -8.68e-06 -3.91e-06 1.62e-04 9.37e-02 1.57e-05 -1.01e-05 6.87e-02 -2.71e-04 3.27e-02 4.25e-02 ]
G [ 3.24e-02 5.61e-04 -4.83e-04 1.42e-01 1.26e-01 -5.77e-05 -1.00e-04 4.88e-06 1.43e-01 -7.68e-04 1.61e-02 2.27e-03 -8.32e-04 ]
T [ -1.21e-03 1.58e-03 4.43e-02 -1.13e-06 9.56e-05 3.43e-05 -6.02e-05 -1.86e-05 0.00e+00 3.78e-04 8.24e-03 -1.16e-03 4.19e-04 ]

Frequency matrix

A [ 1683 2391 1309 139 223 8983 331 9534 78 1175 2915 1673 1303 ]
C [ 3820 3274 937 25 11 402 8059 67 21 6661 392 5048 5992 ]
G [ 2701 1668 1094 9565 9475 81 986 44 9634 648 3158 2187 572 ]
T [ 1552 2422 6416 26 46 289 379 110 22 1271 3291 847 1889 ]

28 profiles found for the same TF (REST) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000383.1 REST ENCSR867WPH liver Homo sapiens
BP000442.1 REST ENCSR000BJJ SK-N-SH Homo sapiens
BP000564.1 REST ENCSR000BQP A549 Homo sapiens
BP000696.1 REST ENCSR000BJP PFSK-1 Homo sapiens
BP000728.1 REST ENCSR663WAR H1 Homo sapiens
BP000790.1 REST ENCSR000BTF HL-60 Homo sapiens
BP000875.1 REST ENCSR000BOZ SK-N-SH Homo sapiens
BP001141.1 REST ENCSR871KYB GM23338 Homo sapiens
Showing 8 profiles of page 3 from 3 pages