Detailed information of deep learning profile BP000464.1

This page shows detailed deep learning-derived predictions and motifs for ATF4 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ATF4
Model ID: BP000464.1
Cell line/tissue: HepG2
Class: Basic leucine zipper factors (bZIP)
Family: ATF-4-related factors
Best Match(es): MA0833.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P18848  
Source: ENCSR803PAI
Model: BPNet

Contribution weight matrix (CWM)

A [ 5.88e-03 -3.80e-05 -3.16e-05 2.93e-02 -4.79e-04 -8.68e-06 8.30e-04 6.33e-02 6.30e-02 -7.18e-04 ]
C [ 4.13e-03 3.94e-05 -2.82e-05 1.20e-05 4.52e-03 -8.16e-06 3.29e-02 1.38e-04 3.78e-05 6.09e-03 ]
G [ 2.41e-03 3.88e-06 4.20e-02 1.71e-03 -4.72e-04 7.26e-02 -6.67e-06 1.07e-05 -8.55e-06 -3.57e-04 ]
T [ -3.26e-04 5.92e-02 2.67e-03 6.46e-06 2.50e-02 -5.56e-05 6.15e-04 -2.82e-06 -1.04e-05 8.74e-03 ]

Frequency matrix

A [ 2243 97 84 4012 329 2 1255 5670 5773 363 ]
C [ 1878 133 122 353 687 5 3627 258 63 1798 ]
G [ 1601 45 4722 901 633 5909 26 5 44 1152 ]
T [ 213 5659 1006 668 4285 18 1026 1 54 2621 ]

Other motif patterns

4 profiles found for the same TF (ATF4) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000520.1 ATF4 ENCSR044UJJ K562 Homo sapiens
BP000573.1 ATF4 ENCSR288ZFV HepG2 Homo sapiens
BP001152.1 ATF4 ENCSR145TSJ K562 Homo sapiens
BP001160.1 ATF4 ENCSR965SHB HepG2 Homo sapiens
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