Detailed information of deep learning profile BP000465.1

This page shows detailed deep learning-derived predictions and motifs for FOXA1 in liver using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: FOXA1
Model ID: BP000465.1
Cell line/tissue: liver
Class: Fork head/winged helix factors
Family: FOX
Best Match(es): MA0148.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P55317  
Source: ENCSR324RCI
Model: BPNet

Contribution weight matrix (CWM)

A [ 5.00e-03 1.33e-02 7.46e-03 3.50e-03 -1.40e-05 4.22e-02 5.24e-02 7.65e-02 7.93e-06 5.26e-02 ]
C [ -5.35e-04 -1.62e-03 -1.43e-04 -9.14e-06 9.12e-04 9.18e-03 9.82e-04 1.34e-06 3.59e-02 -4.88e-05 ]
G [ -9.41e-04 2.58e-03 -9.08e-04 4.15e-02 6.97e-07 7.98e-06 2.15e-06 -1.70e-05 -3.04e-05 -2.75e-05 ]
T [ 1.19e-02 -9.49e-04 9.05e-03 6.33e-05 7.24e-02 6.69e-07 -2.59e-05 -1.31e-06 1.74e-02 -9.43e-05 ]

Frequency matrix

A [ 17667 20598 19699 9884 256 32358 41091 45680 1083 42147 ]
C [ 5294 6638 1019 557 3283 12027 4307 124 28654 896 ]
G [ 3703 11506 8541 32720 220 644 432 93 425 848 ]
T [ 19540 7462 16946 3044 42445 1174 374 307 16042 2313 ]

11 profiles found for the same TF (FOXA1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000233.1 FOXA1 ENCSR126YEB MCF-7 Homo sapiens
BP000287.1 FOXA1 ENCSR000BMO HepG2 Homo sapiens
BP000429.1 FOXA1 ENCSR267DFA HepG2 Homo sapiens
BP000621.1 FOXA1 ENCSR000BKY T47D Homo sapiens
BP000807.1 FOXA1 ENCSR000BRD A549 Homo sapiens
BP000816.1 FOXA1 ENCSR819LHG K562 Homo sapiens
BP000880.1 FOXA1 ENCSR000BLE HepG2 Homo sapiens
BP000958.1 FOXA1 ENCSR735KEY liver Homo sapiens
BP001033.1 FOXA1 ENCSR094WHO HEK293T Homo sapiens
BP001046.1 FOXA1 ENCSR000BPX A549 Homo sapiens
Showing 10 profiles of page 1 from 2 pages