Detailed information of deep learning profile BP000465.1

This page shows detailed deep learning-derived predictions and motifs for FOXA1 in liver using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: FOXA1
Model ID: BP000465.1
Cell line/tissue: liver
Class: Fork head/winged helix factors
Family: FOX
Best Match(es): MA0148.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P55317  
Source: ENCSR324RCI
Model: BPNet

Contribution weight matrix (CWM)

A [ 5.00e-03 1.33e-02 7.46e-03 3.50e-03 -1.40e-05 4.22e-02 5.24e-02 7.65e-02 7.93e-06 5.26e-02 ]
C [ -5.35e-04 -1.62e-03 -1.43e-04 -9.14e-06 9.12e-04 9.18e-03 9.82e-04 1.34e-06 3.59e-02 -4.88e-05 ]
G [ -9.41e-04 2.58e-03 -9.08e-04 4.15e-02 6.97e-07 7.98e-06 2.15e-06 -1.70e-05 -3.04e-05 -2.75e-05 ]
T [ 1.19e-02 -9.49e-04 9.05e-03 6.33e-05 7.24e-02 6.69e-07 -2.59e-05 -1.31e-06 1.74e-02 -9.43e-05 ]

Frequency matrix

A [ 17667 20598 19699 9884 256 32358 41091 45680 1083 42147 ]
C [ 5294 6638 1019 557 3283 12027 4307 124 28654 896 ]
G [ 3703 11506 8541 32720 220 644 432 93 425 848 ]
T [ 19540 7462 16946 3044 42445 1174 374 307 16042 2313 ]

11 profiles found for the same TF (FOXA1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP001104.1 FOXA1 ENCSR865RXA HepG2 Homo sapiens
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