This page shows detailed deep learning-derived predictions and motifs for CTCF in spleen using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000469.1 |
| Cell line/tissue: | spleen |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000DNI |
| Model: | BPNet |
| A [ | -1.35e-03 | -4.39e-03 | -3.95e-03 | -5.65e-05 | -5.34e-04 | 1.21e-02 | -5.54e-04 | -3.38e-04 | -2.93e-03 | 2.39e-02 | -2.40e-03 | -7.28e-03 | -9.48e-04 | -3.34e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.54e-02 | 7.92e-02 | -1.35e-03 | 1.52e-01 | 2.17e-01 | 6.56e-02 | 9.33e-02 | 2.29e-01 | 3.02e-04 | -2.54e-03 | 1.30e-02 | 8.50e-03 | -4.47e-04 | -2.85e-03 | ] |
| G [ | 4.17e-02 | -1.35e-03 | 1.25e-01 | -8.49e-04 | -7.69e-05 | 1.25e-04 | -9.38e-05 | -5.07e-05 | -2.35e-04 | 1.44e-02 | 7.24e-02 | -1.28e-03 | 2.12e-01 | 1.08e-01 | ] |
| T [ | -4.10e-03 | 1.49e-02 | -5.79e-03 | -1.53e-03 | -9.05e-04 | -4.67e-03 | 2.68e-02 | -4.52e-04 | 1.01e-01 | -5.75e-03 | -2.03e-03 | 3.92e-02 | -9.78e-04 | -2.11e-03 | ] |
| A [ | 3499 | 1702 | 3157 | 2976 | 208 | 13188 | 243 | 119 | 1855 | 13271 | 1067 | 4625 | 223 | 2358 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 11626 | 17282 | 1210 | 31268 | 35601 | 20065 | 21639 | 35862 | 2560 | 2772 | 12367 | 5328 | 207 | 2163 | ] |
| G [ | 17549 | 1629 | 26720 | 1157 | 62 | 1130 | 172 | 25 | 922 | 14465 | 20685 | 1416 | 34862 | 28151 | ] |
| T [ | 3541 | 15602 | 5128 | 814 | 344 | 1833 | 14161 | 209 | 30878 | 5707 | 2096 | 24847 | 923 | 3543 | ] |
