Detailed information of deep learning profile BP000470.1

This page shows detailed deep learning-derived predictions and motifs for EGR1 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: EGR1
Model ID: BP000470.1
Cell line/tissue: HepG2
Class: C2H2 zinc finger factors
Family: Three-zinc finger Kruppel-related
Best Match(es): MA0162.5
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P18146  
Source: ENCSR026GSW
Model: BPNet

Contribution weight matrix (CWM)

A [ 8.45e-04 -2.84e-04 5.17e-04 2.55e-06 -1.08e-06 -2.47e-05 1.32e-02 -5.20e-06 -1.09e-03 -3.18e-04 ]
C [ 2.00e-02 4.81e-02 5.88e-05 6.33e-02 4.99e-02 4.24e-02 1.06e-02 6.52e-02 4.56e-05 2.41e-02 ]
G [ -2.19e-04 -2.12e-06 3.00e-02 3.68e-05 1.49e-05 6.22e-07 2.89e-05 3.60e-05 2.55e-02 1.17e-04 ]
T [ -5.87e-04 -2.96e-04 -1.30e-03 -3.28e-06 7.49e-06 3.89e-04 -4.98e-05 -2.93e-05 -1.09e-03 -2.64e-04 ]

Frequency matrix

A [ 8987 2334 12019 102 728 1016 20693 313 12771 6013 ]
C [ 62446 77988 3588 83665 79112 70725 48978 82800 14361 53504 ]
G [ 10148 2546 59413 1843 4798 7460 12694 1166 44557 16200 ]
T [ 4091 2806 10654 63 1035 6472 3307 1394 13984 9956 ]

10 profiles found for the same TF (EGR1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000330.1 EGR1 ENCSR024CNP K562 Homo sapiens
BP000348.1 EGR1 ENCSR000BMQ GM12878 Homo sapiens
BP000440.1 EGR1 ENCSR000BRZ HCT116 Homo sapiens
BP000507.1 EGR1 ENCSR211LTF K562 Homo sapiens
BP000628.1 EGR1 ENCSR736BUG liver Homo sapiens
BP000635.1 EGR1 ENCSR000BUX MCF-7 Homo sapiens
BP000770.1 EGR1 ENCSR000BNE K562 Homo sapiens
BP000794.1 EGR1 ENCSR000BJA H1 Homo sapiens
BP001030.1 EGR1 ENCSR290ZOS liver Homo sapiens
BP001164.1 EGR1 ENCSR000BSQ Ishikawa Homo sapiens
Showing 10 profiles of page 1 from 1 pages
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