Detailed information of deep learning profile BP000470.1

This page shows detailed deep learning-derived predictions and motifs for EGR1 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: EGR1
Model ID: BP000470.1
Cell line/tissue: HepG2
Class: C2H2 zinc finger factors
Family: Three-zinc finger Kruppel-related
Best Match(es): MA0162.5
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P18146  
Source: ENCSR026GSW
Model: BPNet

Contribution weight matrix (CWM)

A [ -2.64e-04 -1.09e-03 -2.93e-05 -4.98e-05 3.89e-04 7.49e-06 -3.28e-06 -1.30e-03 -2.96e-04 -5.87e-04 ]
C [ 1.17e-04 2.55e-02 3.60e-05 2.89e-05 6.22e-07 1.49e-05 3.68e-05 3.00e-02 -2.12e-06 -2.19e-04 ]
G [ 2.41e-02 4.56e-05 6.52e-02 1.06e-02 4.24e-02 4.99e-02 6.33e-02 5.88e-05 4.81e-02 2.00e-02 ]
T [ -3.18e-04 -1.09e-03 -5.20e-06 1.32e-02 -2.47e-05 -1.08e-06 2.55e-06 5.17e-04 -2.84e-04 8.45e-04 ]

Frequency matrix

A [ 9956 13984 1394 3307 6472 1035 63 10654 2806 4091 ]
C [ 16200 44557 1166 12694 7460 4798 1843 59413 2546 10148 ]
G [ 53504 14361 82800 48978 70725 79112 83665 3588 77988 62446 ]
T [ 6013 12771 313 20693 1016 728 102 12019 2334 8987 ]

10 profiles found for the same TF (EGR1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000330.1 EGR1 ENCSR024CNP K562 Homo sapiens
BP000348.1 EGR1 ENCSR000BMQ GM12878 Homo sapiens
BP000440.1 EGR1 ENCSR000BRZ HCT116 Homo sapiens
BP000507.1 EGR1 ENCSR211LTF K562 Homo sapiens
BP000628.1 EGR1 ENCSR736BUG liver Homo sapiens
BP000635.1 EGR1 ENCSR000BUX MCF-7 Homo sapiens
BP000770.1 EGR1 ENCSR000BNE K562 Homo sapiens
BP000794.1 EGR1 ENCSR000BJA H1 Homo sapiens
BP001030.1 EGR1 ENCSR290ZOS liver Homo sapiens
BP001164.1 EGR1 ENCSR000BSQ Ishikawa Homo sapiens
Showing 10 profiles of page 1 from 1 pages
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