This page shows detailed deep learning-derived predictions and motifs for CTCF in left lung using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000471.1 |
| Cell line/tissue: | left lung |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR255SQR |
| Model: | BPNet |
| A [ | -7.43e-04 | -2.51e-03 | -2.50e-03 | -1.84e-04 | -4.89e-04 | 5.73e-03 | -3.53e-04 | -1.96e-04 | -1.82e-03 | 1.70e-02 | -1.67e-03 | -5.33e-03 | -4.71e-04 | -2.46e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.12e-02 | 4.67e-02 | -1.89e-04 | 9.84e-02 | 1.46e-01 | 4.78e-02 | 6.42e-02 | 1.52e-01 | 4.94e-04 | -1.94e-03 | 1.12e-02 | 7.08e-03 | -1.78e-04 | -1.41e-03 | ] |
| G [ | 2.47e-02 | -1.32e-04 | 8.18e-02 | 5.33e-04 | 4.81e-05 | 1.48e-04 | -1.78e-05 | -9.96e-06 | -1.23e-04 | 1.49e-02 | 5.99e-02 | -4.98e-04 | 1.62e-01 | 8.58e-02 | ] |
| T [ | -2.65e-03 | 7.67e-03 | -2.71e-03 | -1.24e-03 | -7.57e-04 | -3.07e-03 | 1.68e-02 | -3.23e-04 | 7.52e-02 | -4.45e-03 | -1.59e-03 | 2.75e-02 | -5.20e-04 | -1.31e-03 | ] |
| A [ | 2892 | 1676 | 2587 | 2389 | 344 | 10414 | 253 | 105 | 1504 | 10848 | 841 | 3835 | 3 | 1702 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 9676 | 15673 | 1191 | 26512 | 30014 | 17423 | 19156 | 30636 | 2142 | 2545 | 10447 | 4549 | 13 | 1822 | ] |
| G [ | 15264 | 1748 | 22995 | 1264 | 217 | 1493 | 280 | 57 | 1052 | 13081 | 18168 | 1281 | 30964 | 24890 | ] |
| T [ | 3176 | 11910 | 4235 | 843 | 433 | 1678 | 11319 | 210 | 26310 | 4534 | 1553 | 21343 | 28 | 2593 | ] |
