This page shows detailed deep learning-derived predictions and motifs for CTCF in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000472.1 |
| Cell line/tissue: | A549 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR414CQB |
| Model: | BPNet |
| A [ | -1.37e-03 | -3.41e-03 | -2.54e-03 | 1.65e-04 | -4.70e-04 | 8.71e-03 | -5.19e-04 | -2.57e-04 | -2.18e-03 | 1.70e-02 | -2.03e-03 | -4.73e-03 | -6.96e-04 | -2.47e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 9.08e-03 | 5.49e-02 | -1.06e-03 | 1.02e-01 | 1.47e-01 | 4.64e-02 | 6.02e-02 | 1.59e-01 | 3.44e-04 | -1.82e-03 | 9.95e-03 | 4.67e-03 | -4.86e-04 | -1.69e-03 | ] |
| G [ | 3.42e-02 | -7.72e-04 | 8.87e-02 | -3.23e-04 | -4.46e-05 | -4.14e-04 | -1.67e-04 | -4.40e-05 | -2.86e-04 | 1.11e-02 | 4.86e-02 | -5.16e-04 | 1.49e-01 | 7.27e-02 | ] |
| T [ | -2.70e-03 | 8.17e-03 | -3.57e-03 | -1.13e-03 | -5.95e-04 | -4.27e-03 | 1.65e-02 | -4.38e-04 | 6.53e-02 | -4.44e-03 | -1.69e-03 | 2.27e-02 | -9.70e-04 | -1.95e-03 | ] |
| A [ | 3403 | 1622 | 2731 | 2250 | 104 | 14722 | 250 | 160 | 2140 | 12270 | 894 | 5059 | 43 | 2331 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 10598 | 18371 | 705 | 33008 | 35667 | 17895 | 21181 | 35487 | 2776 | 2969 | 13305 | 4300 | 35 | 1989 | ] |
| G [ | 18401 | 1237 | 27910 | 416 | 33 | 1151 | 241 | 70 | 966 | 14862 | 19615 | 1306 | 35816 | 28367 | ] |
| T [ | 3596 | 14768 | 4653 | 324 | 194 | 2229 | 14326 | 281 | 30116 | 5897 | 2183 | 25333 | 104 | 3311 | ] |
