Detailed information of deep learning profile BP000481.1

This page shows detailed deep learning-derived predictions and motifs for ESR1 in T47D using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ESR1
Model ID: BP000481.1
Cell line/tissue: T47D
Class: Nuclear receptors with C4 zinc fingers
Family: Steroid hormone receptors (NR3)
Best Match(es): MA0112.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P03372  
Source: ENCSR000BKN
Model: BPNet

Contribution weight matrix (CWM)

A [ -8.68e-05 6.19e-05 2.50e-04 -5.62e-04 3.65e-03 2.42e-03 -6.27e-04 1.58e-03 2.77e-05 4.12e-05 2.85e-02 -2.08e-07 1.74e-03 -2.49e-04 ]
C [ 1.11e-05 -5.93e-04 -4.38e-04 5.64e-03 -3.76e-04 5.97e-04 2.46e-03 7.07e-04 1.71e-04 -1.29e-05 8.57e-05 4.27e-02 2.37e-02 2.85e-03 ]
G [ 6.56e-03 4.96e-03 1.17e-03 -6.10e-04 3.08e-03 2.53e-04 3.89e-03 1.81e-03 5.24e-05 3.93e-02 7.50e-05 -3.55e-06 2.75e-05 -1.32e-04 ]
T [ -4.95e-04 -9.87e-05 1.52e-03 3.56e-03 -5.60e-04 4.34e-04 3.09e-04 7.75e-04 3.38e-02 5.65e-05 2.33e-05 1.19e-04 -1.37e-04 1.08e-02 ]

Frequency matrix

A [ 14313 14092 13224 10286 21749 16152 13030 14064 455 1538 42788 98 16419 5717 ]
C [ 8882 8352 10640 20118 8696 14722 15092 15233 1130 347 8167 55982 31655 15222 ]
G [ 20528 20993 12942 9832 12236 12509 13552 14064 130 54232 2721 14 270 4325 ]
T [ 12588 12875 19506 16075 13631 12928 14638 12951 54597 195 2636 218 7969 31049 ]

Alternative motif patterns (AMPs)

5 profiles found for the same TF (ESR1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000282.1 ESR1 ENCSR000BQD T47D Homo sapiens
BP000854.1 ESR1 ENCSR000BIY Ishikawa Homo sapiens
BP000896.1 ESR1 ENCSR000BQR Ishikawa Homo sapiens
BP001071.1 ESR1 ENCSR463GOT MCF-7 Homo sapiens
BP001259.1 ESR1 ENCSR000BJS T47D Homo sapiens
Showing 5 profiles of page 1 from 1 pages
  • 1 (current)