Detailed information of deep learning profile BP000485.1

This page shows detailed deep learning-derived predictions and motifs for RELA in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: RELA
Model ID: BP000485.1
Cell line/tissue: HepG2
Class: Rel homology region (RHR) factors
Family: NF-kappaB-related factors
Best Match(es): MA0107.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q04206  
Source: ENCSR580HOI
Model: BPNet

Contribution weight matrix (CWM)

A [ -1.00e-03 -8.75e-05 1.77e-05 1.50e-02 2.60e-02 1.65e-02 1.10e-04 -2.42e-04 -1.64e-05 -4.51e-05 -5.47e-04 ]
C [ 4.01e-04 1.38e-05 1.17e-04 1.46e-05 1.09e-04 -7.33e-05 -4.22e-04 5.83e-03 2.55e-02 3.35e-02 1.59e-02 ]
G [ 8.39e-03 3.30e-02 2.92e-02 3.13e-03 -6.63e-05 -1.59e-04 2.86e-04 -1.14e-04 2.96e-05 4.61e-05 2.19e-04 ]
T [ -4.08e-04 -3.61e-05 5.44e-05 -2.23e-05 -1.66e-05 1.38e-03 1.15e-02 8.80e-03 8.02e-05 -5.92e-05 -3.17e-04 ]

Frequency matrix

A [ 513 40 104 2199 3147 2552 678 252 194 48 461 ]
C [ 392 26 94 119 81 186 456 1269 2807 3248 2387 ]
G [ 1687 3206 3073 920 85 196 646 256 84 18 273 ]
T [ 744 64 65 98 23 402 1556 1559 251 22 215 ]

7 profiles found for the same TF (RELA) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000234.1 RELA ENCSR000EBD GM18951 Homo sapiens
BP000324.1 RELA ENCSR000EAI GM12891 Homo sapiens
BP000338.1 RELA ENCSR000EBM GM19193 Homo sapiens
BP000357.1 RELA ENCSR000EAG GM12878 Homo sapiens
BP000574.1 RELA ENCSR000EAQ GM15510 Homo sapiens
BP000725.1 RELA ENCSR000EAN GM12892 Homo sapiens
BP000749.1 RELA ENCSR664POU GM12878 Homo sapiens
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