This page shows detailed deep learning-derived predictions and motifs for CTCF in upper lobe of left lung using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000486.1 |
| Cell line/tissue: | upper lobe of left lung |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR224WWI |
| Model: | BPNet |
| A [ | -1.93e-03 | -5.33e-04 | 2.77e-02 | -1.57e-03 | -5.07e-03 | 7.81e-02 | -3.59e-04 | 1.68e-02 | -2.83e-03 | -5.70e-04 | -1.11e-03 | -2.19e-03 | 9.29e-03 | -2.65e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 9.50e-02 | 1.65e-01 | -7.72e-04 | 6.11e-02 | 1.49e-02 | -2.48e-04 | -4.26e-05 | -7.99e-05 | -2.11e-04 | -7.95e-05 | 1.45e-04 | 8.18e-02 | -5.66e-04 | 2.71e-02 | ] |
| G [ | -1.76e-03 | -2.05e-04 | 6.74e-03 | 1.11e-02 | -2.41e-03 | 1.25e-04 | 1.62e-01 | 6.71e-02 | 5.14e-02 | 1.57e-01 | 1.01e-01 | -3.01e-04 | 4.91e-02 | 1.18e-02 | ] |
| T [ | -2.55e-03 | -4.45e-04 | -4.92e-03 | -1.55e-03 | 1.85e-02 | -1.92e-03 | -1.99e-04 | -3.85e-04 | 4.66e-03 | -3.98e-04 | -6.01e-04 | -3.14e-03 | -2.51e-03 | -1.27e-03 | ] |
| A [ | 2271 | 357 | 18324 | 1278 | 3853 | 22953 | 135 | 10340 | 1288 | 42 | 600 | 3583 | 10627 | 2606 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 21456 | 25991 | 981 | 15806 | 11250 | 810 | 43 | 205 | 1071 | 27 | 831 | 20260 | 1239 | 13343 | ] |
| G [ | 1440 | 148 | 4266 | 8892 | 2065 | 1702 | 26390 | 15880 | 14888 | 26504 | 23243 | 741 | 13527 | 8427 | ] |
| T [ | 1469 | 139 | 3064 | 659 | 9468 | 1170 | 67 | 210 | 9388 | 62 | 1961 | 2051 | 1242 | 2260 | ] |
