This page shows detailed deep learning-derived predictions and motifs for CTCF in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000487.1 |
| Cell line/tissue: | HepG2 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000AMA |
| Model: | BPNet |
| A [ | -4.07e-04 | -3.84e-03 | -3.09e-03 | -6.74e-04 | -8.05e-04 | 3.25e-03 | -6.73e-04 | -3.91e-04 | -2.24e-03 | 2.11e-02 | -2.29e-03 | -5.92e-03 | -7.93e-04 | -2.74e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.00e-02 | 5.48e-02 | 6.53e-04 | 1.06e-01 | 1.72e-01 | 5.75e-02 | 8.45e-02 | 1.88e-01 | 1.31e-03 | -1.99e-03 | 1.49e-02 | 7.06e-03 | -4.95e-04 | -1.71e-03 | ] |
| G [ | 3.07e-02 | 1.05e-03 | 8.34e-02 | 2.30e-03 | -6.94e-05 | -2.36e-04 | -2.19e-04 | -8.74e-05 | -3.64e-04 | 1.81e-02 | 5.74e-02 | 3.37e-04 | 1.80e-01 | 9.72e-02 | ] |
| T [ | -3.19e-03 | 7.48e-03 | -3.53e-03 | -2.18e-03 | -1.16e-03 | -5.49e-03 | 9.50e-03 | -4.21e-04 | 7.65e-02 | -5.02e-03 | -1.46e-03 | 2.65e-02 | -1.29e-03 | -1.80e-03 | ] |
| A [ | 6303 | 3623 | 5050 | 4600 | 536 | 17023 | 795 | 302 | 3542 | 18625 | 1641 | 8516 | 5 | 3080 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 14905 | 23693 | 2821 | 41216 | 50112 | 28982 | 31841 | 50465 | 4488 | 4077 | 18339 | 5245 | 2 | 2900 | ] |
| G [ | 24308 | 4338 | 34506 | 3400 | 105 | 1451 | 322 | 96 | 1191 | 20706 | 28305 | 2292 | 51341 | 40739 | ] |
| T [ | 5832 | 19694 | 8971 | 2131 | 595 | 3892 | 18390 | 485 | 42127 | 7940 | 3063 | 35294 | 0 | 4629 | ] |