This page shows detailed deep learning-derived predictions and motifs for CTCF in lower lobe of right lung using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000489.1 |
| Cell line/tissue: | lower lobe of right lung |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR863HZM |
| Model: | BPNet |
| A [ | -1.82e-03 | -1.04e-03 | 2.36e-02 | -2.30e-03 | -5.35e-03 | 7.84e-02 | -4.54e-04 | 1.82e-02 | -4.15e-03 | -7.94e-04 | -1.54e-03 | -3.14e-03 | 9.54e-03 | -3.11e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 8.91e-02 | 1.74e-01 | -2.44e-04 | 5.95e-02 | 1.61e-02 | -2.28e-04 | -9.49e-05 | -1.76e-04 | -2.65e-04 | -1.14e-04 | -3.27e-04 | 9.17e-02 | -7.74e-04 | 3.31e-02 | ] |
| G [ | -2.11e-03 | -4.66e-04 | 7.17e-03 | 1.28e-02 | -2.33e-03 | 4.61e-04 | 1.77e-01 | 7.64e-02 | 5.59e-02 | 1.68e-01 | 1.11e-01 | -8.62e-04 | 5.72e-02 | 1.19e-02 | ] |
| T [ | -2.88e-03 | -8.18e-04 | -5.73e-03 | -2.08e-03 | 2.07e-02 | -2.42e-03 | -3.21e-04 | -5.79e-04 | 5.26e-03 | -6.14e-04 | -2.63e-04 | -3.36e-03 | -3.45e-03 | -1.26e-03 | ] |
| A [ | 3432 | 12 | 24482 | 2012 | 5388 | 29507 | 283 | 13936 | 2175 | 162 | 472 | 4505 | 14881 | 3521 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 27491 | 35328 | 1379 | 19380 | 14442 | 1139 | 60 | 276 | 1475 | 19 | 580 | 27326 | 1572 | 17069 | ] |
| G [ | 2218 | 0 | 4658 | 12839 | 3071 | 2703 | 34864 | 20864 | 18753 | 35097 | 31853 | 822 | 17262 | 11503 | ] |
| T [ | 2201 | 2 | 4822 | 1111 | 12441 | 1993 | 135 | 266 | 12939 | 64 | 2437 | 2689 | 1626 | 3249 | ] |
