This page shows detailed deep learning-derived predictions and motifs for CTCF in transverse colon using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000493.1 |
| Cell line/tissue: | transverse colon |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR769WKR |
| Model: | BPNet |
| A [ | -1.17e-03 | -2.66e-03 | -2.70e-03 | -3.09e-04 | -5.48e-04 | 6.60e-03 | -2.92e-04 | -2.52e-04 | -1.71e-03 | 1.69e-02 | -1.58e-03 | -4.20e-03 | -4.67e-04 | -2.54e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.16e-02 | 4.75e-02 | -8.04e-04 | 9.58e-02 | 1.46e-01 | 4.31e-02 | 6.41e-02 | 1.63e-01 | 2.78e-04 | -1.33e-03 | 1.16e-02 | 5.25e-03 | -1.47e-04 | -1.44e-03 | ] |
| G [ | 2.62e-02 | -6.14e-04 | 8.08e-02 | -6.64e-05 | 2.97e-05 | 1.88e-04 | -3.11e-05 | -1.47e-05 | -5.28e-05 | 1.67e-02 | 6.16e-02 | -1.79e-04 | 1.69e-01 | 8.52e-02 | ] |
| T [ | -2.84e-03 | 8.18e-03 | -2.74e-03 | -1.11e-03 | -7.46e-04 | -2.91e-03 | 1.86e-02 | -3.08e-04 | 6.97e-02 | -5.06e-03 | -1.78e-03 | 2.61e-02 | -5.59e-04 | -1.77e-03 | ] |
| A [ | 2834 | 1502 | 2472 | 2235 | 264 | 11299 | 217 | 113 | 1644 | 10323 | 840 | 4163 | 1 | 1956 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 9926 | 15168 | 899 | 27087 | 30023 | 16112 | 18438 | 30383 | 2112 | 2479 | 10940 | 3945 | 1 | 1988 | ] |
| G [ | 14821 | 1558 | 23188 | 727 | 100 | 1445 | 229 | 52 | 955 | 13183 | 17270 | 1216 | 30749 | 23881 | ] |
| T [ | 3172 | 12525 | 4194 | 704 | 366 | 1897 | 11869 | 205 | 26042 | 4767 | 1703 | 21428 | 2 | 2927 | ] |
