This page shows detailed deep learning-derived predictions and motifs for CTCF in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000494.1 |
| Cell line/tissue: | HepG2 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR607XFI |
| Model: | BPNet |
| A [ | 1.39e-02 | -1.17e-03 | -3.45e-03 | -2.61e-03 | 2.80e-04 | -5.22e-04 | 7.75e-03 | -5.13e-04 | -4.22e-04 | -1.85e-03 | 1.38e-02 | -1.97e-03 | -4.56e-03 | -9.36e-04 | -2.47e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | -1.19e-03 | 1.03e-02 | 5.10e-02 | -1.26e-03 | 9.45e-02 | 1.39e-01 | 4.21e-02 | 6.34e-02 | 1.41e-01 | 5.96e-04 | -1.70e-03 | 1.04e-02 | 5.20e-03 | -4.87e-04 | -1.67e-03 | ] |
| G [ | 1.13e-02 | 3.05e-02 | -7.74e-04 | 8.10e-02 | -6.42e-04 | -6.23e-05 | -2.50e-04 | -1.85e-04 | -7.68e-05 | -2.58e-04 | 1.18e-02 | 4.04e-02 | -2.72e-04 | 1.36e-01 | 6.39e-02 | ] |
| T [ | -3.01e-03 | -2.60e-03 | 8.30e-03 | -3.76e-03 | -1.37e-03 | -7.15e-04 | -4.43e-03 | 1.47e-02 | -3.98e-04 | 5.37e-02 | -3.28e-03 | -1.20e-03 | 1.84e-02 | -1.24e-03 | -1.28e-03 | ] |
| A [ | 21639 | 5132 | 2083 | 4088 | 3712 | 509 | 17416 | 459 | 277 | 4958 | 14525 | 2653 | 10215 | 619 | 3502 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 6363 | 15171 | 31823 | 1871 | 49085 | 53615 | 29810 | 39126 | 53961 | 5475 | 7558 | 25587 | 9383 | 908 | 4932 | ] |
| G [ | 19465 | 29778 | 2353 | 41239 | 1173 | 222 | 2773 | 314 | 153 | 2125 | 23935 | 21721 | 3956 | 51667 | 41441 | ] |
| T [ | 7524 | 4910 | 18731 | 7793 | 1021 | 645 | 4992 | 15092 | 600 | 42432 | 8974 | 5031 | 31437 | 1798 | 5116 | ] |
