Detailed information of deep learning profile BP000495.1

This page shows detailed deep learning-derived predictions and motifs for HMBOX1 in K562 using a single trained BPNet model.

Model details

Name: HMBOX1
Model ID: BP000495.1
Cell line/tissue: K562
Class: Homeo domain factors
Family: POU domain factors
Best Match(es): MA0895.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q6NT76  
Source: ENCSR757IIU
Model: BPNet

Contribution weight matrix (CWM)

A [ 5.55e-04 -2.03e-03 -8.71e-04 2.29e-02 0.00e+00 -1.87e-04 -5.15e-05 2.80e-02 8.16e-03 -4.02e-03 -3.80e-03 -1.72e-03 -3.43e-04 -1.83e-03 -7.18e-04 -9.23e-04 1.14e-03 4.53e-04 -3.29e-04 -1.32e-03 1.87e-03 -2.07e-04 1.76e-03 -5.89e-04 6.69e-04 1.40e-03 4.50e-03 ]
C [ 1.07e-03 1.30e-03 -6.73e-05 0.00e+00 0.00e+00 0.00e+00 -5.69e-05 0.00e+00 1.87e-04 2.14e-03 3.57e-03 1.01e-03 8.35e-04 2.47e-03 1.56e-03 1.70e-03 2.27e-03 1.02e-03 2.67e-03 1.22e-03 2.01e-03 2.07e-03 2.38e-03 7.13e-03 2.16e-03 3.05e-03 2.50e-03 ]
G [ 1.07e-02 3.23e-03 9.61e-05 8.36e-05 7.57e-02 0.00e+00 0.00e+00 -1.78e-05 5.31e-03 4.87e-03 1.92e-03 2.36e-03 2.64e-03 3.51e-03 1.17e-03 1.62e-03 2.54e-03 2.35e-03 1.71e-03 1.50e-03 2.32e-03 4.68e-03 3.84e-03 1.40e-03 1.03e-03 1.95e-03 4.68e-03 ]
T [ -2.07e-03 6.04e-04 2.22e-02 0.00e+00 0.00e+00 3.31e-02 3.07e-02 -1.21e-05 -6.56e-04 -6.27e-04 3.84e-04 -1.17e-03 -1.59e-03 -3.81e-04 -1.25e-03 6.35e-04 -2.35e-04 -4.70e-04 -3.51e-04 1.55e-03 3.81e-04 -3.78e-04 1.61e-03 1.64e-03 2.84e-03 2.79e-03 1.09e-04 ]

Frequency matrix

A [ 23197 12808 13852 60973 0 6238 5760 55602 32147 21567 22439 22051 23114 24031 23214 23255 22943 23214 23466 23156 23098 22633 22635 22945 22693 22713 22613 ]
C [ 13672 23001 13310 1303 0 480 8603 3676 10638 15754 13729 15318 14589 14738 15192 15165 15405 15744 15996 16180 15870 15870 16163 16008 15891 16259 16461 ]
G [ 21569 20927 9663 14730 79369 158 1993 7188 20598 21237 19174 18263 16246 17112 17188 16744 17246 16848 16616 17246 16994 16974 17219 16928 17296 17025 17236 ]
T [ 20930 22633 42545 2363 0 72493 63013 12903 15986 20811 24028 23737 25420 23488 23776 24205 23776 23563 23291 22788 23408 23892 23352 23488 23488 23372 23059 ]