This page shows detailed deep learning-derived predictions and motifs for CTCF in HFFc6 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000497.1 |
| Cell line/tissue: | HFFc6 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR163ULN |
| Model: | BPNet |
| A [ | -3.18e-04 | -2.77e-03 | -2.41e-03 | -6.53e-04 | -3.10e-04 | 2.52e-03 | -7.62e-04 | -2.42e-04 | -2.15e-03 | 1.75e-02 | -1.88e-03 | -4.84e-03 | -9.31e-04 | -2.15e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 6.78e-03 | 4.05e-02 | 4.30e-04 | 8.49e-02 | 1.38e-01 | 5.34e-02 | 7.58e-02 | 1.54e-01 | 1.14e-03 | -1.69e-03 | 9.28e-03 | 4.74e-03 | -6.36e-04 | -1.87e-03 | ] |
| G [ | 2.21e-02 | 6.51e-04 | 6.10e-02 | 1.76e-03 | 9.90e-07 | -1.43e-04 | -1.61e-04 | -3.81e-05 | -3.02e-04 | 1.37e-02 | 4.84e-02 | 3.72e-04 | 1.43e-01 | 8.08e-02 | ] |
| T [ | -1.87e-03 | 5.84e-03 | -1.82e-03 | -1.98e-03 | -4.36e-04 | -4.76e-03 | 9.98e-03 | -2.58e-04 | 6.75e-02 | -3.95e-03 | -1.45e-03 | 2.21e-02 | -1.20e-03 | -1.37e-03 | ] |
| A [ | 8207 | 4665 | 5831 | 5351 | 250 | 19776 | 837 | 7 | 3824 | 22519 | 2200 | 11077 | 205 | 4191 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 19066 | 30289 | 3204 | 53263 | 63589 | 36884 | 40335 | 64256 | 4866 | 5704 | 23766 | 8826 | 130 | 4253 | ] |
| G [ | 29061 | 5469 | 43918 | 3572 | 103 | 2380 | 506 | 3 | 1624 | 26113 | 33686 | 3456 | 62852 | 49313 | ] |
| T [ | 7944 | 23855 | 11325 | 2091 | 336 | 5238 | 22600 | 12 | 53964 | 9941 | 4627 | 40920 | 1091 | 6521 | ] |
